Protein–RNA interactions for Protein: D3YUM8

Gm4950, Proteasome subunit beta type, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4950D3YUM8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
Gm4950D3YUM8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.8■□□□□ 0.76
Gm4950D3YUM8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm4950D3YUM8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gm4950D3YUM8 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm4950D3YUM8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gm4950D3YUM8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gm4950D3YUM8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.78■□□□□ 0.76
Gm4950D3YUM8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.78■□□□□ 0.76
Gm4950D3YUM8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm4950D3YUM8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
Gm4950D3YUM8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm4950D3YUM8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm4950D3YUM8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm4950D3YUM8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Gm4950D3YUM8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Gm4950D3YUM8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
Gm4950D3YUM8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Gm4950D3YUM8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm4950D3YUM8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.75■□□□□ 0.75
Gm4950D3YUM8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm4950D3YUM8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm4950D3YUM8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Gm4950D3YUM8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Gm4950D3YUM8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm4950D3YUM8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm4950D3YUM8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
Gm4950D3YUM8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Gm4950D3YUM8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Gm4950D3YUM8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.73■□□□□ 0.75
Gm4950D3YUM8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Gm4950D3YUM8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm4950D3YUM8 Nkain2-201ENSMUST00000092602 558 ntBASIC19.72■□□□□ 0.75
Gm4950D3YUM8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Gm4950D3YUM8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm4950D3YUM8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm4950D3YUM8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm4950D3YUM8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Gm4950D3YUM8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm4950D3YUM8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm4950D3YUM8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm4950D3YUM8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.68■□□□□ 0.74
Gm4950D3YUM8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gm4950D3YUM8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm4950D3YUM8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Gm4950D3YUM8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.67■□□□□ 0.74
Gm4950D3YUM8 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.67■□□□□ 0.74
Gm4950D3YUM8 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.67■□□□□ 0.74
Gm4950D3YUM8 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.67■□□□□ 0.74
Gm4950D3YUM8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm4950D3YUM8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm4950D3YUM8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Gm4950D3YUM8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Gm4950D3YUM8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gm4950D3YUM8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.66■□□□□ 0.74
Gm4950D3YUM8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm4950D3YUM8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm4950D3YUM8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.65■□□□□ 0.74
Gm4950D3YUM8 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm4950D3YUM8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Gm4950D3YUM8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.65■□□□□ 0.74
Gm4950D3YUM8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.65■□□□□ 0.74
Gm4950D3YUM8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Gm4950D3YUM8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm4950D3YUM8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm4950D3YUM8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.64■□□□□ 0.73
Gm4950D3YUM8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Gm4950D3YUM8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm4950D3YUM8 Particl-201ENSMUST00000205370 1560 ntBASIC19.63■□□□□ 0.73
Gm4950D3YUM8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm4950D3YUM8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gm4950D3YUM8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.62■□□□□ 0.73
Gm4950D3YUM8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm4950D3YUM8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Gm4950D3YUM8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.62■□□□□ 0.73
Gm4950D3YUM8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gm4950D3YUM8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm4950D3YUM8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm4950D3YUM8 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.6■□□□□ 0.73
Gm4950D3YUM8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm4950D3YUM8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Gm4950D3YUM8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm4950D3YUM8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Gm4950D3YUM8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.58■□□□□ 0.73
Gm4950D3YUM8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.58■□□□□ 0.72
Gm4950D3YUM8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Gm4950D3YUM8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gm4950D3YUM8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm4950D3YUM8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm4950D3YUM8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm4950D3YUM8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Gm4950D3YUM8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Gm4950D3YUM8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Gm4950D3YUM8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm4950D3YUM8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm4950D3YUM8 Gm6821-201ENSMUST00000107540 542 ntBASIC19.54■□□□□ 0.72
Gm4950D3YUM8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gm4950D3YUM8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gm4950D3YUM8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Gm4950D3YUM8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms