Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col6a4A2AX52 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Col6a4A2AX52 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col6a4A2AX52 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col6a4A2AX52 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Col6a4A2AX52 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Col6a4A2AX52 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.84■□□□□ 0.77
Col6a4A2AX52 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.84■□□□□ 0.77
Col6a4A2AX52 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.84■□□□□ 0.77
Col6a4A2AX52 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col6a4A2AX52 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col6a4A2AX52 Gm37136-201ENSMUST00000194368 194 ntBASIC19.82■□□□□ 0.76
Col6a4A2AX52 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.82■□□□□ 0.76
Col6a4A2AX52 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.82■□□□□ 0.76
Col6a4A2AX52 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col6a4A2AX52 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col6a4A2AX52 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col6a4A2AX52 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col6a4A2AX52 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col6a4A2AX52 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col6a4A2AX52 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Col6a4A2AX52 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.8■□□□□ 0.76
Col6a4A2AX52 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Col6a4A2AX52 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col6a4A2AX52 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Col6a4A2AX52 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col6a4A2AX52 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col6a4A2AX52 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col6a4A2AX52 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col6a4A2AX52 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col6a4A2AX52 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col6a4A2AX52 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.78■□□□□ 0.76
Col6a4A2AX52 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col6a4A2AX52 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.77■□□□□ 0.76
Col6a4A2AX52 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.77■□□□□ 0.76
Col6a4A2AX52 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col6a4A2AX52 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col6a4A2AX52 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col6a4A2AX52 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.77■□□□□ 0.76
Col6a4A2AX52 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col6a4A2AX52 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col6a4A2AX52 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col6a4A2AX52 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col6a4A2AX52 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col6a4A2AX52 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.75■□□□□ 0.75
Col6a4A2AX52 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.75■□□□□ 0.75
Col6a4A2AX52 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col6a4A2AX52 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col6a4A2AX52 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col6a4A2AX52 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col6a4A2AX52 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col6a4A2AX52 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.73■□□□□ 0.75
Col6a4A2AX52 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.73■□□□□ 0.75
Col6a4A2AX52 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col6a4A2AX52 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Col6a4A2AX52 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.72■□□□□ 0.75
Col6a4A2AX52 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col6a4A2AX52 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19.72■□□□□ 0.75
Col6a4A2AX52 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Col6a4A2AX52 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col6a4A2AX52 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Col6a4A2AX52 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col6a4A2AX52 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.71■□□□□ 0.75
Col6a4A2AX52 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.71■□□□□ 0.75
Col6a4A2AX52 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.7■□□□□ 0.74
Col6a4A2AX52 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.7■□□□□ 0.74
Col6a4A2AX52 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Col6a4A2AX52 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.7■□□□□ 0.74
Col6a4A2AX52 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col6a4A2AX52 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col6a4A2AX52 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col6a4A2AX52 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col6a4A2AX52 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col6a4A2AX52 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.68■□□□□ 0.74
Col6a4A2AX52 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col6a4A2AX52 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Col6a4A2AX52 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col6a4A2AX52 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col6a4A2AX52 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col6a4A2AX52 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Col6a4A2AX52 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col6a4A2AX52 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.67■□□□□ 0.74
Col6a4A2AX52 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col6a4A2AX52 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Col6a4A2AX52 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col6a4A2AX52 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col6a4A2AX52 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col6a4A2AX52 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col6a4A2AX52 Gm9812-201ENSMUST00000061934 968 ntBASIC19.65■□□□□ 0.74
Col6a4A2AX52 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col6a4A2AX52 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Col6a4A2AX52 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.65■□□□□ 0.74
Col6a4A2AX52 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Col6a4A2AX52 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col6a4A2AX52 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.64■□□□□ 0.73
Col6a4A2AX52 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.64■□□□□ 0.73
Col6a4A2AX52 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col6a4A2AX52 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col6a4A2AX52 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col6a4A2AX52 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms