Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.08■□□□□ 0.96
Smim17A0A504 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Smim17A0A504 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Smim17A0A504 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smim17A0A504 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smim17A0A504 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
Smim17A0A504 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
Smim17A0A504 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
Smim17A0A504 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Smim17A0A504 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Smim17A0A504 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smim17A0A504 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Smim17A0A504 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smim17A0A504 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smim17A0A504 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smim17A0A504 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smim17A0A504 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smim17A0A504 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smim17A0A504 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smim17A0A504 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smim17A0A504 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smim17A0A504 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.02■□□□□ 0.96
Smim17A0A504 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Smim17A0A504 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smim17A0A504 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Smim17A0A504 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Smim17A0A504 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smim17A0A504 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Smim17A0A504 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Smim17A0A504 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smim17A0A504 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Smim17A0A504 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smim17A0A504 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Smim17A0A504 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smim17A0A504 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21■□□□□ 0.95
Smim17A0A504 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smim17A0A504 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smim17A0A504 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.99■□□□□ 0.95
Smim17A0A504 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Smim17A0A504 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.98■□□□□ 0.95
Smim17A0A504 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smim17A0A504 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smim17A0A504 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smim17A0A504 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Smim17A0A504 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.97■□□□□ 0.95
Smim17A0A504 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Smim17A0A504 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smim17A0A504 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smim17A0A504 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Smim17A0A504 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smim17A0A504 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.95■□□□□ 0.95
Smim17A0A504 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smim17A0A504 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smim17A0A504 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smim17A0A504 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Smim17A0A504 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smim17A0A504 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.94■□□□□ 0.94
Smim17A0A504 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smim17A0A504 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Smim17A0A504 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smim17A0A504 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smim17A0A504 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smim17A0A504 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smim17A0A504 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smim17A0A504 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Smim17A0A504 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smim17A0A504 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Smim17A0A504 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smim17A0A504 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.91■□□□□ 0.94
Smim17A0A504 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smim17A0A504 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Smim17A0A504 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Smim17A0A504 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smim17A0A504 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smim17A0A504 Gm27322-201ENSMUST00000184007 104 ntBASIC20.9■□□□□ 0.94
Smim17A0A504 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smim17A0A504 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smim17A0A504 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smim17A0A504 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smim17A0A504 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smim17A0A504 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smim17A0A504 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Smim17A0A504 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
Smim17A0A504 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.89■□□□□ 0.93
Smim17A0A504 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
Smim17A0A504 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.89■□□□□ 0.93
Smim17A0A504 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smim17A0A504 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smim17A0A504 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smim17A0A504 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Smim17A0A504 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smim17A0A504 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smim17A0A504 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smim17A0A504 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smim17A0A504 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smim17A0A504 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smim17A0A504 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smim17A0A504 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.86■□□□□ 0.93
Smim17A0A504 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smim17A0A504 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms