Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv29A0A0G2LB96 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv29A0A0G2LB96 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv29A0A0G2LB96 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Trbv29A0A0G2LB96 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv29A0A0G2LB96 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trbv29A0A0G2LB96 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trbv29A0A0G2LB96 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trbv29A0A0G2LB96 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trbv29A0A0G2LB96 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trbv29A0A0G2LB96 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Trbv29A0A0G2LB96 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trbv29A0A0G2LB96 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Trbv29A0A0G2LB96 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trbv29A0A0G2LB96 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.26■□□□□ 0.67
Trbv29A0A0G2LB96 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv29A0A0G2LB96 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv29A0A0G2LB96 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Trbv29A0A0G2LB96 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv29A0A0G2LB96 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv29A0A0G2LB96 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv29A0A0G2LB96 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv29A0A0G2LB96 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv29A0A0G2LB96 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.23■□□□□ 0.67
Trbv29A0A0G2LB96 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.22■□□□□ 0.67
Trbv29A0A0G2LB96 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trbv29A0A0G2LB96 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv29A0A0G2LB96 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Trbv29A0A0G2LB96 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv29A0A0G2LB96 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv29A0A0G2LB96 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Trbv29A0A0G2LB96 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Trbv29A0A0G2LB96 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv29A0A0G2LB96 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Trbv29A0A0G2LB96 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv29A0A0G2LB96 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv29A0A0G2LB96 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv29A0A0G2LB96 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv29A0A0G2LB96 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.2■□□□□ 0.66
Trbv29A0A0G2LB96 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv29A0A0G2LB96 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv29A0A0G2LB96 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Trbv29A0A0G2LB96 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv29A0A0G2LB96 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Trbv29A0A0G2LB96 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv29A0A0G2LB96 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv29A0A0G2LB96 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv29A0A0G2LB96 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
Trbv29A0A0G2LB96 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv29A0A0G2LB96 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Trbv29A0A0G2LB96 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv29A0A0G2LB96 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv29A0A0G2LB96 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv29A0A0G2LB96 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv29A0A0G2LB96 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv29A0A0G2LB96 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv29A0A0G2LB96 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv29A0A0G2LB96 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Trbv29A0A0G2LB96 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Trbv29A0A0G2LB96 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.14■□□□□ 0.65
Trbv29A0A0G2LB96 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trbv29A0A0G2LB96 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv29A0A0G2LB96 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.13■□□□□ 0.65
Trbv29A0A0G2LB96 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv29A0A0G2LB96 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv29A0A0G2LB96 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv29A0A0G2LB96 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv29A0A0G2LB96 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv29A0A0G2LB96 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv29A0A0G2LB96 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv29A0A0G2LB96 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv29A0A0G2LB96 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv29A0A0G2LB96 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv29A0A0G2LB96 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv29A0A0G2LB96 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv29A0A0G2LB96 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv29A0A0G2LB96 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv29A0A0G2LB96 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Trbv29A0A0G2LB96 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Trbv29A0A0G2LB96 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv29A0A0G2LB96 Gm45855-201ENSMUST00000212546 880 ntBASIC19.1■□□□□ 0.65
Trbv29A0A0G2LB96 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Trbv29A0A0G2LB96 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv29A0A0G2LB96 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv29A0A0G2LB96 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv29A0A0G2LB96 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.09■□□□□ 0.65
Trbv29A0A0G2LB96 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv29A0A0G2LB96 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Trbv29A0A0G2LB96 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trbv29A0A0G2LB96 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trbv29A0A0G2LB96 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv29A0A0G2LB96 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv29A0A0G2LB96 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv29A0A0G2LB96 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.07■□□□□ 0.64
Trbv29A0A0G2LB96 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv29A0A0G2LB96 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Trbv29A0A0G2LB96 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trbv29A0A0G2LB96 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Trbv29A0A0G2LB96 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trbv29A0A0G2LB96 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms