Protein–RNA interactions for Protein: A0A0B4J1P5

Trbv26, T cell receptor beta, variable 26 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv26A0A0B4J1P5 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv26A0A0B4J1P5 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv26A0A0B4J1P5 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trbv26A0A0B4J1P5 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv26A0A0B4J1P5 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv26A0A0B4J1P5 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv26A0A0B4J1P5 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.25■□□□□ 0.67
Trbv26A0A0B4J1P5 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv26A0A0B4J1P5 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv26A0A0B4J1P5 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv26A0A0B4J1P5 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.24■□□□□ 0.67
Trbv26A0A0B4J1P5 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.24■□□□□ 0.67
Trbv26A0A0B4J1P5 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Trbv26A0A0B4J1P5 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv26A0A0B4J1P5 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv26A0A0B4J1P5 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trbv26A0A0B4J1P5 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv26A0A0B4J1P5 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv26A0A0B4J1P5 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trbv26A0A0B4J1P5 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trbv26A0A0B4J1P5 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trbv26A0A0B4J1P5 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.22■□□□□ 0.67
Trbv26A0A0B4J1P5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trbv26A0A0B4J1P5 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv26A0A0B4J1P5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv26A0A0B4J1P5 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv26A0A0B4J1P5 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv26A0A0B4J1P5 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv26A0A0B4J1P5 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv26A0A0B4J1P5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv26A0A0B4J1P5 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv26A0A0B4J1P5 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv26A0A0B4J1P5 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv26A0A0B4J1P5 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv26A0A0B4J1P5 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv26A0A0B4J1P5 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv26A0A0B4J1P5 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv26A0A0B4J1P5 Gm37136-201ENSMUST00000194368 194 ntBASIC19.19■□□□□ 0.66
Trbv26A0A0B4J1P5 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv26A0A0B4J1P5 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv26A0A0B4J1P5 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv26A0A0B4J1P5 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv26A0A0B4J1P5 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv26A0A0B4J1P5 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv26A0A0B4J1P5 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv26A0A0B4J1P5 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv26A0A0B4J1P5 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv26A0A0B4J1P5 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trbv26A0A0B4J1P5 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv26A0A0B4J1P5 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.16■□□□□ 0.66
Trbv26A0A0B4J1P5 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv26A0A0B4J1P5 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv26A0A0B4J1P5 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.15■□□□□ 0.66
Trbv26A0A0B4J1P5 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv26A0A0B4J1P5 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv26A0A0B4J1P5 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv26A0A0B4J1P5 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Trbv26A0A0B4J1P5 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trbv26A0A0B4J1P5 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trbv26A0A0B4J1P5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv26A0A0B4J1P5 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv26A0A0B4J1P5 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv26A0A0B4J1P5 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Trbv26A0A0B4J1P5 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv26A0A0B4J1P5 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv26A0A0B4J1P5 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv26A0A0B4J1P5 Gm4799-201ENSMUST00000095396 657 ntBASIC19.11■□□□□ 0.65
Trbv26A0A0B4J1P5 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv26A0A0B4J1P5 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv26A0A0B4J1P5 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv26A0A0B4J1P5 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Trbv26A0A0B4J1P5 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Trbv26A0A0B4J1P5 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv26A0A0B4J1P5 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.08■□□□□ 0.64
Trbv26A0A0B4J1P5 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv26A0A0B4J1P5 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv26A0A0B4J1P5 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv26A0A0B4J1P5 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.07■□□□□ 0.64
Trbv26A0A0B4J1P5 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Trbv26A0A0B4J1P5 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.07■□□□□ 0.64
Trbv26A0A0B4J1P5 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trbv26A0A0B4J1P5 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trbv26A0A0B4J1P5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trbv26A0A0B4J1P5 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.06■□□□□ 0.64
Trbv26A0A0B4J1P5 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trbv26A0A0B4J1P5 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trbv26A0A0B4J1P5 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trbv26A0A0B4J1P5 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.05■□□□□ 0.64
Trbv26A0A0B4J1P5 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv26A0A0B4J1P5 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv26A0A0B4J1P5 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.04■□□□□ 0.64
Trbv26A0A0B4J1P5 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Trbv26A0A0B4J1P5 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trbv26A0A0B4J1P5 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Trbv26A0A0B4J1P5 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trbv26A0A0B4J1P5 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trbv26A0A0B4J1P5 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Trbv26A0A0B4J1P5 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trbv26A0A0B4J1P5 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trbv26A0A0B4J1P5 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms