Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv13-3A0A0B4J1H2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Trbv13-3A0A0B4J1H2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.2■□□□□ 0.5
Trbv13-3A0A0B4J1H2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trbv13-3A0A0B4J1H2 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv13-3A0A0B4J1H2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv13-3A0A0B4J1H2 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.19■□□□□ 0.5
Trbv13-3A0A0B4J1H2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Trbv13-3A0A0B4J1H2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv13-3A0A0B4J1H2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv13-3A0A0B4J1H2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Trbv13-3A0A0B4J1H2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv13-3A0A0B4J1H2 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.18■□□□□ 0.5
Trbv13-3A0A0B4J1H2 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv13-3A0A0B4J1H2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv13-3A0A0B4J1H2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv13-3A0A0B4J1H2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv13-3A0A0B4J1H2 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv13-3A0A0B4J1H2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv13-3A0A0B4J1H2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv13-3A0A0B4J1H2 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv13-3A0A0B4J1H2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Trbv13-3A0A0B4J1H2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trbv13-3A0A0B4J1H2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv13-3A0A0B4J1H2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv13-3A0A0B4J1H2 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv13-3A0A0B4J1H2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv13-3A0A0B4J1H2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv13-3A0A0B4J1H2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trbv13-3A0A0B4J1H2 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv13-3A0A0B4J1H2 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv13-3A0A0B4J1H2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Trbv13-3A0A0B4J1H2 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv13-3A0A0B4J1H2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv13-3A0A0B4J1H2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv13-3A0A0B4J1H2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv13-3A0A0B4J1H2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.14■□□□□ 0.49
Trbv13-3A0A0B4J1H2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv13-3A0A0B4J1H2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.13■□□□□ 0.49
Trbv13-3A0A0B4J1H2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv13-3A0A0B4J1H2 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv13-3A0A0B4J1H2 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trbv13-3A0A0B4J1H2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv13-3A0A0B4J1H2 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv13-3A0A0B4J1H2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv13-3A0A0B4J1H2 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv13-3A0A0B4J1H2 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv13-3A0A0B4J1H2 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv13-3A0A0B4J1H2 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.11■□□□□ 0.49
Trbv13-3A0A0B4J1H2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trbv13-3A0A0B4J1H2 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.1■□□□□ 0.49
Trbv13-3A0A0B4J1H2 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.1■□□□□ 0.49
Trbv13-3A0A0B4J1H2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv13-3A0A0B4J1H2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv13-3A0A0B4J1H2 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trbv13-3A0A0B4J1H2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trbv13-3A0A0B4J1H2 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.09■□□□□ 0.49
Trbv13-3A0A0B4J1H2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv13-3A0A0B4J1H2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trbv13-3A0A0B4J1H2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv13-3A0A0B4J1H2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trbv13-3A0A0B4J1H2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.03■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trbv13-3A0A0B4J1H2 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms