Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav17A0A075B655 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav17A0A075B655 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav17A0A075B655 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav17A0A075B655 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav17A0A075B655 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav17A0A075B655 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav17A0A075B655 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav17A0A075B655 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav17A0A075B655 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav17A0A075B655 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.41■□□□□ 0.54
Trav17A0A075B655 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav17A0A075B655 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
Trav17A0A075B655 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trav17A0A075B655 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav17A0A075B655 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.4■□□□□ 0.54
Trav17A0A075B655 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.4■□□□□ 0.54
Trav17A0A075B655 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav17A0A075B655 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trav17A0A075B655 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.39■□□□□ 0.53
Trav17A0A075B655 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav17A0A075B655 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trav17A0A075B655 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trav17A0A075B655 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav17A0A075B655 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav17A0A075B655 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav17A0A075B655 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.38■□□□□ 0.53
Trav17A0A075B655 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav17A0A075B655 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav17A0A075B655 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Trav17A0A075B655 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.37■□□□□ 0.53
Trav17A0A075B655 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.37■□□□□ 0.53
Trav17A0A075B655 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav17A0A075B655 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav17A0A075B655 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav17A0A075B655 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Trav17A0A075B655 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trav17A0A075B655 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trav17A0A075B655 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav17A0A075B655 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav17A0A075B655 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav17A0A075B655 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
Trav17A0A075B655 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.33■□□□□ 0.52
Trav17A0A075B655 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.33■□□□□ 0.52
Trav17A0A075B655 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav17A0A075B655 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav17A0A075B655 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Trav17A0A075B655 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav17A0A075B655 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.32■□□□□ 0.52
Trav17A0A075B655 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trav17A0A075B655 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trav17A0A075B655 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Trav17A0A075B655 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav17A0A075B655 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Trav17A0A075B655 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.31■□□□□ 0.52
Trav17A0A075B655 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav17A0A075B655 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav17A0A075B655 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.31■□□□□ 0.52
Trav17A0A075B655 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav17A0A075B655 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav17A0A075B655 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trav17A0A075B655 Particl-201ENSMUST00000205370 1560 ntBASIC18.3■□□□□ 0.52
Trav17A0A075B655 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav17A0A075B655 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.29■□□□□ 0.52
Trav17A0A075B655 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav17A0A075B655 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav17A0A075B655 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav17A0A075B655 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav17A0A075B655 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav17A0A075B655 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav17A0A075B655 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav17A0A075B655 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav17A0A075B655 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trav17A0A075B655 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trav17A0A075B655 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav17A0A075B655 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav17A0A075B655 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Trav17A0A075B655 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav17A0A075B655 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trav17A0A075B655 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav17A0A075B655 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav17A0A075B655 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav17A0A075B655 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.25■□□□□ 0.51
Trav17A0A075B655 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav17A0A075B655 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav17A0A075B655 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav17A0A075B655 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Trav17A0A075B655 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav17A0A075B655 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav17A0A075B655 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav17A0A075B655 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav17A0A075B655 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.22■□□□□ 0.51
Trav17A0A075B655 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav17A0A075B655 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trav17A0A075B655 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trav17A0A075B655 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav17A0A075B655 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trav17A0A075B655 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav17A0A075B655 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.2■□□□□ 0.5
Trav17A0A075B655 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms