Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trav4-4-dv10A0A075B651 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav4-4-dv10A0A075B651 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trav4-4-dv10A0A075B651 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav4-4-dv10A0A075B651 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav4-4-dv10A0A075B651 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav4-4-dv10A0A075B651 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav4-4-dv10A0A075B651 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.1■□□□□ 0.49
Trav4-4-dv10A0A075B651 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Trav4-4-dv10A0A075B651 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Trav4-4-dv10A0A075B651 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav4-4-dv10A0A075B651 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Trav4-4-dv10A0A075B651 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav4-4-dv10A0A075B651 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.09■□□□□ 0.49
Trav4-4-dv10A0A075B651 Zfp131-205ENSMUST00000223812 663 ntBASIC18.09■□□□□ 0.49
Trav4-4-dv10A0A075B651 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav4-4-dv10A0A075B651 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav4-4-dv10A0A075B651 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav4-4-dv10A0A075B651 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav4-4-dv10A0A075B651 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.06■□□□□ 0.48
Trav4-4-dv10A0A075B651 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trav4-4-dv10A0A075B651 Gm30023-201ENSMUST00000197970 889 ntBASIC18.06■□□□□ 0.48
Trav4-4-dv10A0A075B651 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav4-4-dv10A0A075B651 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav4-4-dv10A0A075B651 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
Trav4-4-dv10A0A075B651 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Trav4-4-dv10A0A075B651 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav4-4-dv10A0A075B651 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav4-4-dv10A0A075B651 Gm24970-201ENSMUST00000175582 82 ntBASIC18.05■□□□□ 0.48
Trav4-4-dv10A0A075B651 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.05■□□□□ 0.48
Trav4-4-dv10A0A075B651 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Trav4-4-dv10A0A075B651 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav4-4-dv10A0A075B651 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav4-4-dv10A0A075B651 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav4-4-dv10A0A075B651 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav4-4-dv10A0A075B651 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.04■□□□□ 0.48
Trav4-4-dv10A0A075B651 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.04■□□□□ 0.48
Trav4-4-dv10A0A075B651 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav4-4-dv10A0A075B651 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav4-4-dv10A0A075B651 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav4-4-dv10A0A075B651 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav4-4-dv10A0A075B651 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav4-4-dv10A0A075B651 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav4-4-dv10A0A075B651 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav4-4-dv10A0A075B651 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav4-4-dv10A0A075B651 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trav4-4-dv10A0A075B651 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav4-4-dv10A0A075B651 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav4-4-dv10A0A075B651 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav4-4-dv10A0A075B651 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav4-4-dv10A0A075B651 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav4-4-dv10A0A075B651 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav4-4-dv10A0A075B651 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav4-4-dv10A0A075B651 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Trav4-4-dv10A0A075B651 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav4-4-dv10A0A075B651 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
Trav4-4-dv10A0A075B651 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav4-4-dv10A0A075B651 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18■□□□□ 0.47
Trav4-4-dv10A0A075B651 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav4-4-dv10A0A075B651 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav4-4-dv10A0A075B651 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav4-4-dv10A0A075B651 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav4-4-dv10A0A075B651 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.99■□□□□ 0.47
Trav4-4-dv10A0A075B651 Gm9397-201ENSMUST00000200125 605 ntBASIC17.99■□□□□ 0.47
Trav4-4-dv10A0A075B651 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav4-4-dv10A0A075B651 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.98■□□□□ 0.47
Trav4-4-dv10A0A075B651 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.98■□□□□ 0.47
Trav4-4-dv10A0A075B651 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav4-4-dv10A0A075B651 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav4-4-dv10A0A075B651 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav4-4-dv10A0A075B651 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav4-4-dv10A0A075B651 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav4-4-dv10A0A075B651 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav4-4-dv10A0A075B651 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Trav4-4-dv10A0A075B651 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav4-4-dv10A0A075B651 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.96■□□□□ 0.47
Trav4-4-dv10A0A075B651 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC17.96■□□□□ 0.47
Trav4-4-dv10A0A075B651 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav4-4-dv10A0A075B651 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav4-4-dv10A0A075B651 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trav4-4-dv10A0A075B651 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav4-4-dv10A0A075B651 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav4-4-dv10A0A075B651 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav4-4-dv10A0A075B651 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trav4-4-dv10A0A075B651 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav4-4-dv10A0A075B651 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trav4-4-dv10A0A075B651 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Trav4-4-dv10A0A075B651 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav4-4-dv10A0A075B651 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav4-4-dv10A0A075B651 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav4-4-dv10A0A075B651 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.93■□□□□ 0.46
Trav4-4-dv10A0A075B651 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Trav4-4-dv10A0A075B651 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav4-4-dv10A0A075B651 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav4-4-dv10A0A075B651 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.91■□□□□ 0.46
Trav4-4-dv10A0A075B651 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav4-4-dv10A0A075B651 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trav4-4-dv10A0A075B651 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav4-4-dv10A0A075B651 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trav4-4-dv10A0A075B651 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms