Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trav10A0A075B642 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trav10A0A075B642 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav10A0A075B642 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav10A0A075B642 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Trav10A0A075B642 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Trav10A0A075B642 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.56■□□□□ 0.88
Trav10A0A075B642 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav10A0A075B642 Particl-201ENSMUST00000205370 1560 ntBASIC20.55■□□□□ 0.88
Trav10A0A075B642 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trav10A0A075B642 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.55■□□□□ 0.88
Trav10A0A075B642 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav10A0A075B642 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav10A0A075B642 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trav10A0A075B642 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Trav10A0A075B642 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trav10A0A075B642 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trav10A0A075B642 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trav10A0A075B642 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav10A0A075B642 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav10A0A075B642 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav10A0A075B642 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav10A0A075B642 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav10A0A075B642 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trav10A0A075B642 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav10A0A075B642 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav10A0A075B642 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trav10A0A075B642 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav10A0A075B642 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Trav10A0A075B642 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trav10A0A075B642 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trav10A0A075B642 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav10A0A075B642 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav10A0A075B642 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trav10A0A075B642 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav10A0A075B642 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trav10A0A075B642 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav10A0A075B642 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
Trav10A0A075B642 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav10A0A075B642 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav10A0A075B642 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav10A0A075B642 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav10A0A075B642 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav10A0A075B642 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav10A0A075B642 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav10A0A075B642 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trav10A0A075B642 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trav10A0A075B642 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trav10A0A075B642 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav10A0A075B642 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav10A0A075B642 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav10A0A075B642 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trav10A0A075B642 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav10A0A075B642 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Trav10A0A075B642 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav10A0A075B642 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav10A0A075B642 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav10A0A075B642 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav10A0A075B642 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
Trav10A0A075B642 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Trav10A0A075B642 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trav10A0A075B642 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav10A0A075B642 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav10A0A075B642 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav10A0A075B642 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav10A0A075B642 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav10A0A075B642 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav10A0A075B642 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav10A0A075B642 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trav10A0A075B642 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav10A0A075B642 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.39■□□□□ 0.85
Trav10A0A075B642 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav10A0A075B642 Gm37136-201ENSMUST00000194368 194 ntBASIC20.39■□□□□ 0.85
Trav10A0A075B642 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Trav10A0A075B642 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Trav10A0A075B642 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.38■□□□□ 0.85
Trav10A0A075B642 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.38■□□□□ 0.85
Trav10A0A075B642 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.38■□□□□ 0.85
Trav10A0A075B642 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
Trav10A0A075B642 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Trav10A0A075B642 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav10A0A075B642 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trav10A0A075B642 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trav10A0A075B642 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trav10A0A075B642 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav10A0A075B642 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav10A0A075B642 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav10A0A075B642 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trav10A0A075B642 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.35■□□□□ 0.85
Trav10A0A075B642 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.35■□□□□ 0.85
Trav10A0A075B642 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav10A0A075B642 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Trav10A0A075B642 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trav10A0A075B642 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav10A0A075B642 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav10A0A075B642 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Trav10A0A075B642 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trav10A0A075B642 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trav10A0A075B642 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trav10A0A075B642 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms