Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trav10A0A075B642 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trav10A0A075B642 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav10A0A075B642 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav10A0A075B642 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Trav10A0A075B642 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Trav10A0A075B642 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.56■□□□□ 0.88
Trav10A0A075B642 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav10A0A075B642 Particl-201ENSMUST00000205370 1560 ntBASIC20.55■□□□□ 0.88
Trav10A0A075B642 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trav10A0A075B642 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.55■□□□□ 0.88
Trav10A0A075B642 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav10A0A075B642 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav10A0A075B642 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trav10A0A075B642 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Trav10A0A075B642 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trav10A0A075B642 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trav10A0A075B642 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trav10A0A075B642 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav10A0A075B642 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav10A0A075B642 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav10A0A075B642 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav10A0A075B642 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav10A0A075B642 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trav10A0A075B642 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav10A0A075B642 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav10A0A075B642 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trav10A0A075B642 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav10A0A075B642 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Trav10A0A075B642 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trav10A0A075B642 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trav10A0A075B642 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav10A0A075B642 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav10A0A075B642 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trav10A0A075B642 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav10A0A075B642 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trav10A0A075B642 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav10A0A075B642 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
Trav10A0A075B642 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav10A0A075B642 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav10A0A075B642 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav10A0A075B642 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav10A0A075B642 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav10A0A075B642 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav10A0A075B642 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav10A0A075B642 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trav10A0A075B642 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trav10A0A075B642 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trav10A0A075B642 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav10A0A075B642 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav10A0A075B642 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav10A0A075B642 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trav10A0A075B642 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav10A0A075B642 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Trav10A0A075B642 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav10A0A075B642 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav10A0A075B642 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav10A0A075B642 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav10A0A075B642 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
Trav10A0A075B642 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Trav10A0A075B642 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trav10A0A075B642 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav10A0A075B642 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav10A0A075B642 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav10A0A075B642 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav10A0A075B642 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav10A0A075B642 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav10A0A075B642 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav10A0A075B642 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trav10A0A075B642 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav10A0A075B642 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.39■□□□□ 0.85
Trav10A0A075B642 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav10A0A075B642 Gm37136-201ENSMUST00000194368 194 ntBASIC20.39■□□□□ 0.85
Trav10A0A075B642 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Trav10A0A075B642 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Trav10A0A075B642 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.38■□□□□ 0.85
Trav10A0A075B642 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.38■□□□□ 0.85
Trav10A0A075B642 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.38■□□□□ 0.85
Trav10A0A075B642 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
Trav10A0A075B642 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Trav10A0A075B642 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav10A0A075B642 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trav10A0A075B642 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trav10A0A075B642 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trav10A0A075B642 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav10A0A075B642 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav10A0A075B642 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav10A0A075B642 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trav10A0A075B642 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.35■□□□□ 0.85
Trav10A0A075B642 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.35■□□□□ 0.85
Trav10A0A075B642 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav10A0A075B642 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Trav10A0A075B642 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trav10A0A075B642 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav10A0A075B642 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav10A0A075B642 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Trav10A0A075B642 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trav10A0A075B642 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trav10A0A075B642 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trav10A0A075B642 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms