Protein–RNA interactions for Protein: A0A075B5W6

Ighv1-55, Immunoglobulin heavy variable 1-55 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-55A0A075B5W6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-55A0A075B5W6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Ighv1-55A0A075B5W6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Ighv1-55A0A075B5W6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-55A0A075B5W6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-55A0A075B5W6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-55A0A075B5W6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-55A0A075B5W6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Ighv1-55A0A075B5W6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv1-55A0A075B5W6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv1-55A0A075B5W6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv1-55A0A075B5W6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ighv1-55A0A075B5W6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-55A0A075B5W6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-55A0A075B5W6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-55A0A075B5W6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-55A0A075B5W6 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-55A0A075B5W6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-55A0A075B5W6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-55A0A075B5W6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-55A0A075B5W6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-55A0A075B5W6 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-55A0A075B5W6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv1-55A0A075B5W6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv1-55A0A075B5W6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.31■□□□□ 0.52
Ighv1-55A0A075B5W6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Ighv1-55A0A075B5W6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv1-55A0A075B5W6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.3■□□□□ 0.52
Ighv1-55A0A075B5W6 Gm37136-201ENSMUST00000194368 194 ntBASIC18.3■□□□□ 0.52
Ighv1-55A0A075B5W6 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-55A0A075B5W6 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.3■□□□□ 0.52
Ighv1-55A0A075B5W6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-55A0A075B5W6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-55A0A075B5W6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.29■□□□□ 0.52
Ighv1-55A0A075B5W6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-55A0A075B5W6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-55A0A075B5W6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-55A0A075B5W6 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Ighv1-55A0A075B5W6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
Ighv1-55A0A075B5W6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.28■□□□□ 0.52
Ighv1-55A0A075B5W6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-55A0A075B5W6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-55A0A075B5W6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-55A0A075B5W6 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ighv1-55A0A075B5W6 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ighv1-55A0A075B5W6 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Ighv1-55A0A075B5W6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-55A0A075B5W6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-55A0A075B5W6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-55A0A075B5W6 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-55A0A075B5W6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Ighv1-55A0A075B5W6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-55A0A075B5W6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-55A0A075B5W6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-55A0A075B5W6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-55A0A075B5W6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-55A0A075B5W6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-55A0A075B5W6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-55A0A075B5W6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.25■□□□□ 0.51
Ighv1-55A0A075B5W6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Ighv1-55A0A075B5W6 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-55A0A075B5W6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-55A0A075B5W6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-55A0A075B5W6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-55A0A075B5W6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-55A0A075B5W6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-55A0A075B5W6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-55A0A075B5W6 Gm7432-201ENSMUST00000210343 879 ntBASIC18.23■□□□□ 0.51
Ighv1-55A0A075B5W6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-55A0A075B5W6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-55A0A075B5W6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv1-55A0A075B5W6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv1-55A0A075B5W6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv1-55A0A075B5W6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv1-55A0A075B5W6 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.21■□□□□ 0.51
Ighv1-55A0A075B5W6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-55A0A075B5W6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-55A0A075B5W6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-55A0A075B5W6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-55A0A075B5W6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-55A0A075B5W6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
Ighv1-55A0A075B5W6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-55A0A075B5W6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Ighv1-55A0A075B5W6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-55A0A075B5W6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-55A0A075B5W6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-55A0A075B5W6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.18■□□□□ 0.5
Ighv1-55A0A075B5W6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-55A0A075B5W6 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-55A0A075B5W6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-55A0A075B5W6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-55A0A075B5W6 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-55A0A075B5W6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-55A0A075B5W6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-55A0A075B5W6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ighv1-55A0A075B5W6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.16■□□□□ 0.5
Ighv1-55A0A075B5W6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-55A0A075B5W6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-55A0A075B5W6 Gm11599-201ENSMUST00000118720 878 ntBASIC18.15■□□□□ 0.5
Ighv1-55A0A075B5W6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 9.9 ms