Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AC007671.2-201ENST00000637344 619 ntBASIC2.92□□□□□ -1.94
HDAC3O15379 AL035425.3-201ENST00000564206 4996 ntBASIC2.92□□□□□ -1.94
HDAC3O15379 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HDAC3O15379 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
HDAC3O15379 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
HDAC3O15379 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.91□□□□□ -1.94
HDAC3O15379 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.91□□□□□ -1.94
HDAC3O15379 AL391994.1-201ENST00000254724 282 ntBASIC2.91□□□□□ -1.94
HDAC3O15379 SNORD116-1-201ENST00000384335 95 ntBASIC2.91□□□□□ -1.94
HDAC3O15379 RPL23AP29-201ENST00000397284 453 ntBASIC2.91□□□□□ -1.94
HDAC3O15379 TMSB4XP8-201ENST00000402089 135 ntBASIC2.91□□□□□ -1.94
HDAC3O15379 AL121978.1-201ENST00000402778 359 ntBASIC2.91□□□□□ -1.94
HDAC3O15379 TMSB4XP6-201ENST00000415187 135 ntBASIC2.91□□□□□ -1.94
HDAC3O15379 AC245052.5-201ENST00000416320 649 ntBASIC2.91□□□□□ -1.94
HDAC3O15379 AC090960.1-201ENST00000421072 306 ntBASIC2.91□□□□□ -1.94
HDAC3O15379 TMSB4XP1-201ENST00000424567 135 ntBASIC2.91□□□□□ -1.94
HDAC3O15379 YME1L1P1-201ENST00000429435 297 ntBASIC2.91□□□□□ -1.94
HDAC3O15379 VN1R108P-201ENST00000431580 830 ntBASIC2.91□□□□□ -1.94
HDAC3O15379 AC241584.1-201ENST00000438469 1241 ntBASIC2.91□□□□□ -1.94
HDAC3O15379 MTCYBP3-201ENST00000445588 1137 ntBASIC2.91□□□□□ -1.94
HDAC3O15379 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.91□□□□□ -1.94
HDAC3O15379 AL358232.1-201ENST00000448030 501 ntBASIC2.91□□□□□ -1.94
HDAC3O15379 PDSS1P2-201ENST00000449397 678 ntBASIC2.91□□□□□ -1.94
HDAC3O15379 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.91□□□□□ -1.94
HDAC3O15379 TRGVB-201ENST00000453257 471 ntBASIC2.91□□□□□ -1.94
HDAC3O15379 RN7SL863P-201ENST00000462370 296 ntBASIC2.91□□□□□ -1.94
HDAC3O15379 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.91□□□□□ -1.94
HDAC3O15379 RPL21P10-201ENST00000463521 490 ntBASIC2.91□□□□□ -1.94
HDAC3O15379 AC008155.2-201ENST00000464337 397 ntBASIC2.91□□□□□ -1.94
HDAC3O15379 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.91□□□□□ -1.94
HDAC3O15379 MTCYBP17-201ENST00000503579 789 ntBASIC2.91□□□□□ -1.94
HDAC3O15379 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.91□□□□□ -1.94
HDAC3O15379 HMGB1P28-201ENST00000507778 552 ntBASIC2.91□□□□□ -1.94
HDAC3O15379 SLC25A15P5-201ENST00000508033 253 ntBASIC2.91□□□□□ -1.94
HDAC3O15379 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.91□□□□□ -1.94
HDAC3O15379 RNU6-759P-201ENST00000516740 103 ntBASIC2.91□□□□□ -1.94
HDAC3O15379 SNORA31.20-201ENST00000517111 133 ntBASIC2.91□□□□□ -1.94
HDAC3O15379 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.91□□□□□ -1.94
HDAC3O15379 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.91□□□□□ -1.94
HDAC3O15379 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.91□□□□□ -1.94
HDAC3O15379 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.91□□□□□ -1.94
HDAC3O15379 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.91□□□□□ -1.94
HDAC3O15379 SLC2A13P1-201ENST00000531560 322 ntBASIC2.91□□□□□ -1.94
HDAC3O15379 AC090502.2-201ENST00000549267 280 ntBASIC2.91□□□□□ -1.94
HDAC3O15379 CCNG2P1-201ENST00000549521 1000 ntBASIC2.91□□□□□ -1.94
HDAC3O15379 AC125611.1-201ENST00000549563 229 ntBASIC2.91□□□□□ -1.94
HDAC3O15379 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.91□□□□□ -1.94
HDAC3O15379 AC109446.2-201ENST00000567872 497 ntBASIC2.91□□□□□ -1.94
HDAC3O15379 AC053481.3-201ENST00000577881 843 ntBASIC2.91□□□□□ -1.94
HDAC3O15379 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.91□□□□□ -1.94
HDAC3O15379 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.91□□□□□ -1.94
HDAC3O15379 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.91□□□□□ -1.94
HDAC3O15379 AL031985.2-201ENST00000600955 480 ntBASIC2.91□□□□□ -1.94
HDAC3O15379 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.91□□□□□ -1.94
HDAC3O15379 AL359198.2-201ENST00000611836 194 ntBASIC2.91□□□□□ -1.94
HDAC3O15379 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.91□□□□□ -1.94
HDAC3O15379 AL607023.1-201ENST00000620045 248 ntBASIC2.91□□□□□ -1.94
HDAC3O15379 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.91□□□□□ -1.94
HDAC3O15379 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.91□□□□□ -1.94
HDAC3O15379 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HDAC3O15379 AL355596.1-201ENST00000565399 3996 ntBASIC2.9□□□□□ -1.94
HDAC3O15379 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.9□□□□□ -1.94
HDAC3O15379 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.9□□□□□ -1.95
HDAC3O15379 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HDAC3O15379 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.9□□□□□ -1.95
HDAC3O15379 RNU6-1200P-201ENST00000384162 107 ntBASIC2.9□□□□□ -1.95
HDAC3O15379 AL590084.2-201ENST00000401481 382 ntBASIC2.9□□□□□ -1.95
HDAC3O15379 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.9□□□□□ -1.95
HDAC3O15379 AC098592.1-201ENST00000419352 333 ntBASIC2.9□□□□□ -1.95
HDAC3O15379 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.9□□□□□ -1.95
HDAC3O15379 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.9□□□□□ -1.95
HDAC3O15379 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.9□□□□□ -1.95
HDAC3O15379 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
HDAC3O15379 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.9□□□□□ -1.95
HDAC3O15379 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.9□□□□□ -1.95
HDAC3O15379 UBBP3-201ENST00000445497 241 ntBASIC2.9□□□□□ -1.95
HDAC3O15379 RSL24D1P3-201ENST00000449255 495 ntBASIC2.9□□□□□ -1.95
HDAC3O15379 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.9□□□□□ -1.95
HDAC3O15379 AL109741.2-201ENST00000455561 343 ntBASIC2.9□□□□□ -1.95
HDAC3O15379 snoU13.3-201ENST00000459441 104 ntBASIC2.9□□□□□ -1.95
HDAC3O15379 RPS29P2-201ENST00000479278 136 ntBASIC2.9□□□□□ -1.95
HDAC3O15379 AC026412.2-201ENST00000512270 1075 ntBASIC2.9□□□□□ -1.95
HDAC3O15379 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.9□□□□□ -1.95
HDAC3O15379 MTCO3P28-201ENST00000513351 515 ntBASIC2.9□□□□□ -1.95
HDAC3O15379 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.9□□□□□ -1.95
HDAC3O15379 ELOCP32-201ENST00000548625 324 ntBASIC2.9□□□□□ -1.95
HDAC3O15379 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.9□□□□□ -1.95
HDAC3O15379 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.9□□□□□ -1.95
HDAC3O15379 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.9□□□□□ -1.95
HDAC3O15379 SULT1C2P1-202ENST00000562418 459 ntBASIC2.9□□□□□ -1.95
HDAC3O15379 MTCYBP28-201ENST00000566728 1132 ntBASIC2.9□□□□□ -1.95
HDAC3O15379 AC074051.3-201ENST00000570238 358 ntBASIC2.9□□□□□ -1.95
HDAC3O15379 LARP7P2-201ENST00000575306 125 ntBASIC2.9□□□□□ -1.95
HDAC3O15379 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.9□□□□□ -1.95
HDAC3O15379 MIR4504-201ENST00000577413 92 ntBASIC2.9□□□□□ -1.95
HDAC3O15379 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.9□□□□□ -1.95
HDAC3O15379 UBL5P2-201ENST00000583788 219 ntBASIC2.9□□□□□ -1.95
HDAC3O15379 AC006504.3-201ENST00000586818 523 ntBASIC2.9□□□□□ -1.95
HDAC3O15379 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.9□□□□□ -1.95
HDAC3O15379 VN1R82P-201ENST00000601481 356 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 183 ms