Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 RPS4XP20-201ENST00000505751 772 ntBASIC4.65□□□□□ -1.67
KLF4O43474 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.65□□□□□ -1.67
KLF4O43474 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
KLF4O43474 RNU6-864P-201ENST00000516256 108 ntBASIC4.65□□□□□ -1.67
KLF4O43474 RNU6-1256P-201ENST00000516539 103 ntBASIC4.65□□□□□ -1.67
KLF4O43474 HMGB1P19-201ENST00000517578 577 ntBASIC4.65□□□□□ -1.67
KLF4O43474 AC012400.1-201ENST00000518452 381 ntBASIC4.65□□□□□ -1.67
KLF4O43474 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.65□□□□□ -1.67
KLF4O43474 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.65□□□□□ -1.67
KLF4O43474 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.65□□□□□ -1.67
KLF4O43474 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.65□□□□□ -1.67
KLF4O43474 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.65□□□□□ -1.67
KLF4O43474 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
KLF4O43474 MIR4646-201ENST00000580775 63 ntBASIC4.65□□□□□ -1.67
KLF4O43474 BNIP3P25-201ENST00000596023 559 ntBASIC4.65□□□□□ -1.67
KLF4O43474 AP002799.1-201ENST00000623552 423 ntBASIC4.65□□□□□ -1.67
KLF4O43474 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.65□□□□□ -1.67
KLF4O43474 AC135068.12-201ENST00000637370 931 ntBASIC4.65□□□□□ -1.67
KLF4O43474 MIR1302-1-201ENST00000637932 143 ntBASIC4.65□□□□□ -1.67
KLF4O43474 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.65□□□□□ -1.67
KLF4O43474 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.65□□□□□ -1.67
KLF4O43474 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.65□□□□□ -1.67
KLF4O43474 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.67
KLF4O43474 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
KLF4O43474 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.65□□□□□ -1.67
KLF4O43474 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
KLF4O43474 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
KLF4O43474 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
KLF4O43474 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
KLF4O43474 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.65□□□□□ -1.67
KLF4O43474 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
KLF4O43474 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
KLF4O43474 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
KLF4O43474 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
KLF4O43474 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KLF4O43474 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
KLF4O43474 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KLF4O43474 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
KLF4O43474 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
KLF4O43474 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
KLF4O43474 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
KLF4O43474 SNORA17.1-201ENST00000362945 126 ntBASIC4.64□□□□□ -1.67
KLF4O43474 Y_RNA.460-201ENST00000384255 102 ntBASIC4.64□□□□□ -1.67
KLF4O43474 Y_RNA.509-201ENST00000384506 99 ntBASIC4.64□□□□□ -1.67
KLF4O43474 RNU6-1011P-201ENST00000384668 107 ntBASIC4.64□□□□□ -1.67
KLF4O43474 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
KLF4O43474 BX323014.1-201ENST00000412876 237 ntBASIC4.64□□□□□ -1.67
KLF4O43474 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.64□□□□□ -1.67
KLF4O43474 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.64□□□□□ -1.67
KLF4O43474 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.64□□□□□ -1.67
KLF4O43474 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.64□□□□□ -1.67
KLF4O43474 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.64□□□□□ -1.67
KLF4O43474 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.64□□□□□ -1.67
KLF4O43474 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.64□□□□□ -1.67
KLF4O43474 AC073850.1-201ENST00000449243 255 ntBASIC4.64□□□□□ -1.67
KLF4O43474 AL121877.1-201ENST00000453704 622 ntBASIC4.64□□□□□ -1.67
KLF4O43474 AC023424.1-201ENST00000496058 459 ntBASIC4.64□□□□□ -1.67
KLF4O43474 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.64□□□□□ -1.67
KLF4O43474 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.64□□□□□ -1.67
KLF4O43474 RNU2-58P-201ENST00000516403 183 ntBASIC4.64□□□□□ -1.67
KLF4O43474 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.64□□□□□ -1.67
KLF4O43474 AC090136.1-201ENST00000520009 240 ntBASIC4.64□□□□□ -1.67
KLF4O43474 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.64□□□□□ -1.67
KLF4O43474 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.64□□□□□ -1.67
KLF4O43474 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.64□□□□□ -1.67
KLF4O43474 MIR3936-201ENST00000584304 110 ntBASIC4.64□□□□□ -1.67
KLF4O43474 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.64□□□□□ -1.67
KLF4O43474 uc_338.15-201ENST00000615470 191 ntBASIC4.64□□□□□ -1.67
KLF4O43474 AC022418.1-201ENST00000624118 445 ntBASIC4.64□□□□□ -1.67
KLF4O43474 AL512643.1-201ENST00000635735 524 ntBASIC4.64□□□□□ -1.67
KLF4O43474 AC063976.2-201ENST00000425667 3556 ntBASIC4.64□□□□□ -1.67
KLF4O43474 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.64□□□□□ -1.67
KLF4O43474 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.64□□□□□ -1.67
KLF4O43474 PNPT1P2-201ENST00000456768 2050 ntBASIC4.64□□□□□ -1.67
KLF4O43474 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.64□□□□□ -1.67
KLF4O43474 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.64□□□□□ -1.67
KLF4O43474 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.64□□□□□ -1.67
KLF4O43474 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.63□□□□□ -1.67
KLF4O43474 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.63□□□□□ -1.67
KLF4O43474 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
KLF4O43474 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
KLF4O43474 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
KLF4O43474 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
KLF4O43474 SNORA2.3-201ENST00000383920 135 ntBASIC4.63□□□□□ -1.67
KLF4O43474 MIR550A3-201ENST00000390735 95 ntBASIC4.63□□□□□ -1.67
KLF4O43474 AL645733.1-201ENST00000402250 217 ntBASIC4.63□□□□□ -1.67
KLF4O43474 AL133270.1-201ENST00000402635 279 ntBASIC4.63□□□□□ -1.67
KLF4O43474 CYP4F29P-201ENST00000420685 446 ntBASIC4.63□□□□□ -1.67
KLF4O43474 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.63□□□□□ -1.67
KLF4O43474 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.63□□□□□ -1.67
KLF4O43474 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.63□□□□□ -1.67
KLF4O43474 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.63□□□□□ -1.67
KLF4O43474 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.63□□□□□ -1.67
KLF4O43474 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.63□□□□□ -1.67
KLF4O43474 MTCO3P9-201ENST00000506989 781 ntBASIC4.63□□□□□ -1.67
KLF4O43474 RPL39P5-202ENST00000512505 151 ntBASIC4.63□□□□□ -1.67
KLF4O43474 ENPP7P9-201ENST00000514456 627 ntBASIC4.63□□□□□ -1.67
KLF4O43474 SNORA70.16-201ENST00000516390 95 ntBASIC4.63□□□□□ -1.67
KLF4O43474 Y_RNA.691-201ENST00000516611 103 ntBASIC4.63□□□□□ -1.67
KLF4O43474 RN7SKP66-201ENST00000516681 231 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 175.6 ms