Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Gm37912-201ENSMUST00000191895 3076 ntBASIC19.62■□□□□ 0.73
Mre11Q61216 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Mre11Q61216 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Mre11Q61216 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Mre11Q61216 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
Mre11Q61216 Gm18671-201ENSMUST00000214826 683 ntBASIC19.62■□□□□ 0.73
Mre11Q61216 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Mre11Q61216 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Mre11Q61216 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Mre11Q61216 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Mre11Q61216 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mre11Q61216 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mre11Q61216 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mre11Q61216 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mre11Q61216 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mre11Q61216 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mre11Q61216 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mre11Q61216 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mre11Q61216 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Mre11Q61216 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Mre11Q61216 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mre11Q61216 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Mre11Q61216 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.61■□□□□ 0.73
Mre11Q61216 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mre11Q61216 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mre11Q61216 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mre11Q61216 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mre11Q61216 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mre11Q61216 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mre11Q61216 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.61■□□□□ 0.73
Mre11Q61216 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Mre11Q61216 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Mre11Q61216 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.61■□□□□ 0.73
Mre11Q61216 Gm10138-203ENSMUST00000206952 366 ntBASIC19.61■□□□□ 0.73
Mre11Q61216 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Mre11Q61216 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Mre11Q61216 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mre11Q61216 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mre11Q61216 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mre11Q61216 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Mre11Q61216 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC19.61■□□□□ 0.73
Mre11Q61216 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mre11Q61216 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mre11Q61216 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mre11Q61216 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mre11Q61216 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mre11Q61216 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Mre11Q61216 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mre11Q61216 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mre11Q61216 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Mre11Q61216 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mre11Q61216 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mre11Q61216 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mre11Q61216 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
Mre11Q61216 Gm42569-201ENSMUST00000200539 472 ntBASIC19.6■□□□□ 0.73
Mre11Q61216 Gm10033-202ENSMUST00000211874 928 ntBASIC19.6■□□□□ 0.73
Mre11Q61216 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Mre11Q61216 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mre11Q61216 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mre11Q61216 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Mre11Q61216 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Mre11Q61216 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Mre11Q61216 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mre11Q61216 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC19.6■□□□□ 0.73
Mre11Q61216 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC19.6■□□□□ 0.73
Mre11Q61216 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.59■□□□□ 0.73
Mre11Q61216 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mre11Q61216 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mre11Q61216 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Mre11Q61216 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mre11Q61216 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mre11Q61216 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.59■□□□□ 0.73
Mre11Q61216 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mre11Q61216 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mre11Q61216 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mre11Q61216 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Mre11Q61216 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Mre11Q61216 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Mre11Q61216 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Mre11Q61216 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.59■□□□□ 0.73
Mre11Q61216 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mre11Q61216 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mre11Q61216 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mre11Q61216 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mre11Q61216 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mre11Q61216 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mre11Q61216 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mre11Q61216 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Mre11Q61216 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Mre11Q61216 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Mre11Q61216 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mre11Q61216 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Mre11Q61216 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Mre11Q61216 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC19.58■□□□□ 0.73
Mre11Q61216 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Mre11Q61216 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Mre11Q61216 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Mre11Q61216 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Mre11Q61216 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.58■□□□□ 0.73
Mre11Q61216 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms