Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
4933424G06RikA0A140LIP3 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.67■□□□□ 0.26
4933424G06RikA0A140LIP3 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
4933424G06RikA0A140LIP3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
4933424G06RikA0A140LIP3 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
4933424G06RikA0A140LIP3 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
4933424G06RikA0A140LIP3 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
4933424G06RikA0A140LIP3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
4933424G06RikA0A140LIP3 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
4933424G06RikA0A140LIP3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.66■□□□□ 0.26
4933424G06RikA0A140LIP3 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.66■□□□□ 0.26
4933424G06RikA0A140LIP3 Gm44454-201ENSMUST00000198541 138 ntBASIC16.66■□□□□ 0.26
4933424G06RikA0A140LIP3 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
4933424G06RikA0A140LIP3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.66■□□□□ 0.26
4933424G06RikA0A140LIP3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
4933424G06RikA0A140LIP3 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
4933424G06RikA0A140LIP3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
4933424G06RikA0A140LIP3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
4933424G06RikA0A140LIP3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
4933424G06RikA0A140LIP3 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
4933424G06RikA0A140LIP3 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
4933424G06RikA0A140LIP3 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
4933424G06RikA0A140LIP3 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
4933424G06RikA0A140LIP3 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
4933424G06RikA0A140LIP3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
4933424G06RikA0A140LIP3 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
4933424G06RikA0A140LIP3 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
4933424G06RikA0A140LIP3 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
4933424G06RikA0A140LIP3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
4933424G06RikA0A140LIP3 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
4933424G06RikA0A140LIP3 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
4933424G06RikA0A140LIP3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
4933424G06RikA0A140LIP3 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.65■□□□□ 0.26
4933424G06RikA0A140LIP3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.65■□□□□ 0.26
4933424G06RikA0A140LIP3 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
4933424G06RikA0A140LIP3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.65■□□□□ 0.26
4933424G06RikA0A140LIP3 Gm44771-201ENSMUST00000206975 626 ntBASIC16.65■□□□□ 0.26
4933424G06RikA0A140LIP3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.65■□□□□ 0.26
4933424G06RikA0A140LIP3 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
4933424G06RikA0A140LIP3 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
4933424G06RikA0A140LIP3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
4933424G06RikA0A140LIP3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
4933424G06RikA0A140LIP3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
4933424G06RikA0A140LIP3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
4933424G06RikA0A140LIP3 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
4933424G06RikA0A140LIP3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
4933424G06RikA0A140LIP3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
4933424G06RikA0A140LIP3 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
4933424G06RikA0A140LIP3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
4933424G06RikA0A140LIP3 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
4933424G06RikA0A140LIP3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
4933424G06RikA0A140LIP3 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
4933424G06RikA0A140LIP3 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
4933424G06RikA0A140LIP3 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
4933424G06RikA0A140LIP3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
4933424G06RikA0A140LIP3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
4933424G06RikA0A140LIP3 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
4933424G06RikA0A140LIP3 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
4933424G06RikA0A140LIP3 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.64■□□□□ 0.25
4933424G06RikA0A140LIP3 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.64■□□□□ 0.25
4933424G06RikA0A140LIP3 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.64■□□□□ 0.25
4933424G06RikA0A140LIP3 Gm27867-201ENSMUST00000184778 125 ntBASIC16.64■□□□□ 0.25
4933424G06RikA0A140LIP3 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.64■□□□□ 0.25
4933424G06RikA0A140LIP3 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
4933424G06RikA0A140LIP3 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
4933424G06RikA0A140LIP3 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
4933424G06RikA0A140LIP3 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
4933424G06RikA0A140LIP3 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
4933424G06RikA0A140LIP3 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
4933424G06RikA0A140LIP3 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
4933424G06RikA0A140LIP3 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
4933424G06RikA0A140LIP3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
4933424G06RikA0A140LIP3 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
4933424G06RikA0A140LIP3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
4933424G06RikA0A140LIP3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
4933424G06RikA0A140LIP3 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
4933424G06RikA0A140LIP3 Gm11452-201ENSMUST00000122376 690 ntBASIC16.63■□□□□ 0.25
4933424G06RikA0A140LIP3 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
4933424G06RikA0A140LIP3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
4933424G06RikA0A140LIP3 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
4933424G06RikA0A140LIP3 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
4933424G06RikA0A140LIP3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
4933424G06RikA0A140LIP3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
4933424G06RikA0A140LIP3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
4933424G06RikA0A140LIP3 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
4933424G06RikA0A140LIP3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
4933424G06RikA0A140LIP3 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
4933424G06RikA0A140LIP3 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
4933424G06RikA0A140LIP3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
4933424G06RikA0A140LIP3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
4933424G06RikA0A140LIP3 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
4933424G06RikA0A140LIP3 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
4933424G06RikA0A140LIP3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
4933424G06RikA0A140LIP3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
4933424G06RikA0A140LIP3 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
4933424G06RikA0A140LIP3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
4933424G06RikA0A140LIP3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
4933424G06RikA0A140LIP3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
4933424G06RikA0A140LIP3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
4933424G06RikA0A140LIP3 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms