Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 SNORA77-201ENST00000408716 125 ntBASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 LINC02210-201ENST00000444561 288 ntBASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 RPS15AP27-201ENST00000449183 343 ntBASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 RPL23AP24-201ENST00000458203 385 ntBASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 VN1R17P-201ENST00000472048 1090 ntBASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 AC012181.1-201ENST00000479895 423 ntBASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 HMGN1P9-201ENST00000515212 298 ntBASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 RNU6-256P-201ENST00000516747 97 ntBASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 AC023632.4-201ENST00000517783 191 ntBASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 RPL23AP84-201ENST00000571193 464 ntBASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 AC007151.1-201ENST00000572774 483 ntBASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 MIR3942-201ENST00000585264 109 ntBASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 DDX18P3-201ENST00000404856 2007 ntBASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TMEM88BA6NKF7 AC083837.1-201ENST00000565297 2994 ntBASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 Y_RNA.212-201ENST00000364177 102 ntBASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 RNA5SP219-201ENST00000390940 113 ntBASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 MTCYBP4-201ENST00000401524 249 ntBASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 PPIAP9-201ENST00000403866 498 ntBASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 MIR548P-201ENST00000408336 84 ntBASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 MIR548K-201ENST00000408406 116 ntBASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 MIR548F5-201ENST00000408421 86 ntBASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 SSXP9-201ENST00000417503 292 ntBASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 HMGB3P11-201ENST00000440127 604 ntBASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 AC073465.2-201ENST00000440938 498 ntBASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 RPS11P1-201ENST00000451072 473 ntBASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 NIPA2P5-201ENST00000452282 464 ntBASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 AC130509.1-201ENST00000464158 433 ntBASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 AC079140.5-201ENST00000507882 310 ntBASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 RN7SKP13-201ENST00000515933 244 ntBASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 AC135001.1-201ENST00000544546 283 ntBASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 AC006504.6-201ENST00000590142 199 ntBASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 AC133104.2-201ENST00000615272 193 ntBASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 AC114781.5-201ENST00000615297 108 ntBASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 AC084781.2-201ENST00000615568 161 ntBASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 RNA5SP196-201ENST00000625967 102 ntBASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 AC006206.1-201ENST00000544842 3387 ntBASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TMEM88BA6NKF7 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TMEM88BA6NKF7 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
TMEM88BA6NKF7 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TMEM88BA6NKF7 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
TMEM88BA6NKF7 AL391684.1-202ENST00000641293 1636 ntBASIC5.78□□□□□ -1.48
TMEM88BA6NKF7 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TMEM88BA6NKF7 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.78□□□□□ -1.48
TMEM88BA6NKF7 MIR208A-201ENST00000362287 71 ntBASIC5.78□□□□□ -1.48
TMEM88BA6NKF7 SNORA62.3-201ENST00000365110 153 ntBASIC5.78□□□□□ -1.48
TMEM88BA6NKF7 SNORA4.3-201ENST00000365564 137 ntBASIC5.78□□□□□ -1.48
TMEM88BA6NKF7 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
TMEM88BA6NKF7 RNU6-393P-201ENST00000384475 107 ntBASIC5.78□□□□□ -1.48
TMEM88BA6NKF7 MIR589-201ENST00000385238 99 ntBASIC5.78□□□□□ -1.48
TMEM88BA6NKF7 Y_RNA.579-201ENST00000390939 94 ntBASIC5.78□□□□□ -1.48
TMEM88BA6NKF7 RNU6-817P-201ENST00000391083 104 ntBASIC5.78□□□□□ -1.48
TMEM88BA6NKF7 AC080125.1-201ENST00000414888 684 ntBASIC5.78□□□□□ -1.48
TMEM88BA6NKF7 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TMEM88BA6NKF7 SNAP23P1-201ENST00000433229 246 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 270.5 ms