Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43aQ3TL54 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.39■□□□□ 0.37
Trim43aQ3TL54 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43aQ3TL54 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43aQ3TL54 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trim43aQ3TL54 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43aQ3TL54 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43aQ3TL54 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trim43aQ3TL54 Gm18958-201ENSMUST00000174258 762 ntBASIC17.39■□□□□ 0.37
Trim43aQ3TL54 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.39■□□□□ 0.37
Trim43aQ3TL54 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43aQ3TL54 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Trim43aQ3TL54 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.39■□□□□ 0.37
Trim43aQ3TL54 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43aQ3TL54 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43aQ3TL54 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43aQ3TL54 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43aQ3TL54 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43aQ3TL54 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trim43aQ3TL54 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43aQ3TL54 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43aQ3TL54 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43aQ3TL54 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim43aQ3TL54 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim43aQ3TL54 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim43aQ3TL54 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Trim43aQ3TL54 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim43aQ3TL54 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim43aQ3TL54 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.38■□□□□ 0.37
Trim43aQ3TL54 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim43aQ3TL54 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim43aQ3TL54 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Trim43aQ3TL54 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim43aQ3TL54 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim43aQ3TL54 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Trim43aQ3TL54 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trim43aQ3TL54 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trim43aQ3TL54 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.38■□□□□ 0.37
Trim43aQ3TL54 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim43aQ3TL54 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim43aQ3TL54 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim43aQ3TL54 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trim43aQ3TL54 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.38■□□□□ 0.37
Trim43aQ3TL54 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.38■□□□□ 0.37
Trim43aQ3TL54 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim43aQ3TL54 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim43aQ3TL54 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim43aQ3TL54 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.38■□□□□ 0.37
Trim43aQ3TL54 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim43aQ3TL54 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43aQ3TL54 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43aQ3TL54 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43aQ3TL54 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43aQ3TL54 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43aQ3TL54 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43aQ3TL54 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43aQ3TL54 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43aQ3TL54 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Trim43aQ3TL54 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43aQ3TL54 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43aQ3TL54 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.37■□□□□ 0.37
Trim43aQ3TL54 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43aQ3TL54 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43aQ3TL54 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43aQ3TL54 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43aQ3TL54 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trim43aQ3TL54 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43aQ3TL54 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43aQ3TL54 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43aQ3TL54 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43aQ3TL54 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43aQ3TL54 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43aQ3TL54 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43aQ3TL54 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim43aQ3TL54 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim43aQ3TL54 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim43aQ3TL54 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim43aQ3TL54 Prob1-201ENSMUST00000097619 3021 ntBASIC17.36■□□□□ 0.37
Trim43aQ3TL54 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim43aQ3TL54 Gm12085-201ENSMUST00000119263 940 ntBASIC17.36■□□□□ 0.37
Trim43aQ3TL54 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.36■□□□□ 0.37
Trim43aQ3TL54 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim43aQ3TL54 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim43aQ3TL54 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Trim43aQ3TL54 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim43aQ3TL54 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim43aQ3TL54 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim43aQ3TL54 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim43aQ3TL54 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim43aQ3TL54 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trim43aQ3TL54 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim43aQ3TL54 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim43aQ3TL54 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim43aQ3TL54 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim43aQ3TL54 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim43aQ3TL54 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.35■□□□□ 0.37
Trim43aQ3TL54 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Trim43aQ3TL54 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim43aQ3TL54 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim43aQ3TL54 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms