Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 OR11H5P-201ENST00000554039 926 ntBASIC3.86□□□□□ -1.79
SHANK3Q9BYB0 AC008507.1-201ENST00000587506 734 ntBASIC3.86□□□□□ -1.79
SHANK3Q9BYB0 AC079089.3-201ENST00000603094 673 ntBASIC3.86□□□□□ -1.79
SHANK3Q9BYB0 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.86□□□□□ -1.79
SHANK3Q9BYB0 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SHANK3Q9BYB0 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.86□□□□□ -1.79
SHANK3Q9BYB0 MAPK10-362ENST00000641864 4484 ntBASIC3.86□□□□□ -1.79
SHANK3Q9BYB0 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SHANK3Q9BYB0 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
SHANK3Q9BYB0 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
SHANK3Q9BYB0 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SHANK3Q9BYB0 U8.2-201ENST00000363156 134 ntBASIC3.85□□□□□ -1.79
SHANK3Q9BYB0 RPL23AP48-201ENST00000406913 488 ntBASIC3.85□□□□□ -1.79
SHANK3Q9BYB0 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.85□□□□□ -1.79
SHANK3Q9BYB0 AC063976.3-201ENST00000426849 329 ntBASIC3.85□□□□□ -1.79
SHANK3Q9BYB0 AC087499.2-201ENST00000432861 149 ntBASIC3.85□□□□□ -1.79
SHANK3Q9BYB0 AC009263.1-201ENST00000441193 1239 ntBASIC3.85□□□□□ -1.79
SHANK3Q9BYB0 AL513328.1-201ENST00000446460 224 ntBASIC3.85□□□□□ -1.79
SHANK3Q9BYB0 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.85□□□□□ -1.79
SHANK3Q9BYB0 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SHANK3Q9BYB0 MIR5047-201ENST00000579212 100 ntBASIC3.85□□□□□ -1.79
SHANK3Q9BYB0 AL035413.2-201ENST00000604801 525 ntBASIC3.85□□□□□ -1.79
SHANK3Q9BYB0 AC103798.2-201ENST00000624292 632 ntBASIC3.85□□□□□ -1.79
SHANK3Q9BYB0 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.85□□□□□ -1.79
SHANK3Q9BYB0 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SHANK3Q9BYB0 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC3.85□□□□□ -1.79
SHANK3Q9BYB0 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SHANK3Q9BYB0 ZNF658B-202ENST00000615961 3375 ntBASIC3.84□□□□□ -1.79
SHANK3Q9BYB0 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SHANK3Q9BYB0 NPM1P24-201ENST00000428039 894 ntBASIC3.84□□□□□ -1.79
SHANK3Q9BYB0 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.84□□□□□ -1.79
SHANK3Q9BYB0 MTCO3P20-201ENST00000454926 688 ntBASIC3.84□□□□□ -1.79
SHANK3Q9BYB0 AC021205.1-201ENST00000468797 348 ntBASIC3.84□□□□□ -1.79
SHANK3Q9BYB0 RNA5SP217-201ENST00000515959 91 ntBASIC3.84□□□□□ -1.79
SHANK3Q9BYB0 IGKV3-31-201ENST00000523109 329 ntBASIC3.84□□□□□ -1.79
SHANK3Q9BYB0 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.84□□□□□ -1.79
SHANK3Q9BYB0 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.84□□□□□ -1.79
SHANK3Q9BYB0 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.84□□□□□ -1.79
SHANK3Q9BYB0 AC009977.1-201ENST00000586015 570 ntBASIC3.84□□□□□ -1.79
SHANK3Q9BYB0 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SHANK3Q9BYB0 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SHANK3Q9BYB0 AC091903.1-201ENST00000624322 454 ntBASIC3.84□□□□□ -1.79
SHANK3Q9BYB0 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.84□□□□□ -1.79
SHANK3Q9BYB0 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.84□□□□□ -1.79
SHANK3Q9BYB0 ASNSP1-201ENST00000518311 1939 ntBASIC3.84□□□□□ -1.79
SHANK3Q9BYB0 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SHANK3Q9BYB0 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SHANK3Q9BYB0 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SHANK3Q9BYB0 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.84□□□□□ -1.8
SHANK3Q9BYB0 AC017002.4-201ENST00000604721 1525 ntBASIC3.84□□□□□ -1.8
SHANK3Q9BYB0 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SHANK3Q9BYB0 RNU2-52P-201ENST00000410680 190 ntBASIC3.84□□□□□ -1.8
SHANK3Q9BYB0 AC105402.1-201ENST00000413336 545 ntBASIC3.84□□□□□ -1.8
SHANK3Q9BYB0 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.84□□□□□ -1.8
SHANK3Q9BYB0 AL591806.2-201ENST00000433122 173 ntBASIC3.84□□□□□ -1.8
SHANK3Q9BYB0 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.84□□□□□ -1.8
SHANK3Q9BYB0 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.84□□□□□ -1.8
SHANK3Q9BYB0 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.84□□□□□ -1.8
SHANK3Q9BYB0 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC3.84□□□□□ -1.8
SHANK3Q9BYB0 RNA5SP445-201ENST00000515889 115 ntBASIC3.84□□□□□ -1.8
SHANK3Q9BYB0 AP001636.2-201ENST00000525517 696 ntBASIC3.84□□□□□ -1.8
SHANK3Q9BYB0 AC007566.2-201ENST00000603642 413 ntBASIC3.84□□□□□ -1.8
SHANK3Q9BYB0 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SHANK3Q9BYB0 AC012020.1-201ENST00000624541 1728 ntBASIC3.84□□□□□ -1.8
SHANK3Q9BYB0 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SHANK3Q9BYB0 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SHANK3Q9BYB0 AL022311.1-201ENST00000623726 19416 ntBASIC3.83□□□□□ -1.8
SHANK3Q9BYB0 OR5AQ1P-203ENST00000641818 1529 ntBASIC3.83□□□□□ -1.8
SHANK3Q9BYB0 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.83□□□□□ -1.8
SHANK3Q9BYB0 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
SHANK3Q9BYB0 Y_RNA.466-201ENST00000384294 113 ntBASIC3.83□□□□□ -1.8
SHANK3Q9BYB0 SMC4P1-201ENST00000414479 527 ntBASIC3.83□□□□□ -1.8
SHANK3Q9BYB0 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.83□□□□□ -1.8
SHANK3Q9BYB0 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.83□□□□□ -1.8
SHANK3Q9BYB0 SNORD109B-201ENST00000458961 67 ntBASIC3.83□□□□□ -1.8
SHANK3Q9BYB0 SNORD109A-201ENST00000459128 67 ntBASIC3.83□□□□□ -1.8
SHANK3Q9BYB0 RPL31P13-201ENST00000484151 370 ntBASIC3.83□□□□□ -1.8
SHANK3Q9BYB0 OR5H3P-201ENST00000502817 919 ntBASIC3.83□□□□□ -1.8
SHANK3Q9BYB0 AC083906.5-201ENST00000503722 328 ntBASIC3.83□□□□□ -1.8
SHANK3Q9BYB0 GOLGA5P1-201ENST00000507317 980 ntBASIC3.83□□□□□ -1.8
SHANK3Q9BYB0 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.83□□□□□ -1.8
SHANK3Q9BYB0 AL049874.4-201ENST00000557593 255 ntBASIC3.83□□□□□ -1.8
SHANK3Q9BYB0 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SHANK3Q9BYB0 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SHANK3Q9BYB0 AL450263.2-201ENST00000439400 589 ntBASIC3.82□□□□□ -1.8
SHANK3Q9BYB0 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.82□□□□□ -1.8
SHANK3Q9BYB0 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.82□□□□□ -1.8
SHANK3Q9BYB0 AC105918.1-201ENST00000474399 838 ntBASIC3.82□□□□□ -1.8
SHANK3Q9BYB0 AC092184.1-201ENST00000625042 715 ntBASIC3.82□□□□□ -1.8
SHANK3Q9BYB0 AC132825.8-201ENST00000640783 297 ntBASIC3.82□□□□□ -1.8
SHANK3Q9BYB0 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SHANK3Q9BYB0 AL592494.2-201ENST00000425455 1548 ntBASIC3.82□□□□□ -1.8
SHANK3Q9BYB0 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SHANK3Q9BYB0 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SHANK3Q9BYB0 RNU1-112P-201ENST00000364401 164 ntBASIC3.81□□□□□ -1.8
SHANK3Q9BYB0 SNORA68.2-201ENST00000391263 128 ntBASIC3.81□□□□□ -1.8
SHANK3Q9BYB0 Z98941.1-201ENST00000407764 100 ntBASIC3.81□□□□□ -1.8
SHANK3Q9BYB0 UBE2V2P4-201ENST00000447495 259 ntBASIC3.81□□□□□ -1.8
SHANK3Q9BYB0 AC010401.1-201ENST00000463867 348 ntBASIC3.81□□□□□ -1.8
SHANK3Q9BYB0 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 208.3 ms