Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Znf235Q61116 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Znf235Q61116 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Znf235Q61116 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Znf235Q61116 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Znf235Q61116 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Znf235Q61116 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Znf235Q61116 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Znf235Q61116 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Znf235Q61116 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.14■□□□□ 0.33
Znf235Q61116 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.14■□□□□ 0.33
Znf235Q61116 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Znf235Q61116 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Znf235Q61116 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Znf235Q61116 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.14■□□□□ 0.33
Znf235Q61116 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Znf235Q61116 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Znf235Q61116 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Znf235Q61116 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Znf235Q61116 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Znf235Q61116 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Znf235Q61116 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Znf235Q61116 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Znf235Q61116 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Znf235Q61116 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Znf235Q61116 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Znf235Q61116 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Znf235Q61116 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Znf235Q61116 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Znf235Q61116 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.13■□□□□ 0.33
Znf235Q61116 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Znf235Q61116 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.13■□□□□ 0.33
Znf235Q61116 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Znf235Q61116 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Znf235Q61116 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Znf235Q61116 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Znf235Q61116 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Znf235Q61116 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Znf235Q61116 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Znf235Q61116 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Znf235Q61116 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Znf235Q61116 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Znf235Q61116 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Znf235Q61116 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Znf235Q61116 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Znf235Q61116 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.12■□□□□ 0.33
Znf235Q61116 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Znf235Q61116 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Znf235Q61116 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Znf235Q61116 Gm6376-201ENSMUST00000209407 580 ntBASIC17.12■□□□□ 0.33
Znf235Q61116 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.12■□□□□ 0.33
Znf235Q61116 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Znf235Q61116 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Znf235Q61116 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Znf235Q61116 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Znf235Q61116 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.12■□□□□ 0.33
Znf235Q61116 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.12■□□□□ 0.33
Znf235Q61116 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Znf235Q61116 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Znf235Q61116 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Znf235Q61116 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Znf235Q61116 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Znf235Q61116 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Znf235Q61116 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.12■□□□□ 0.33
Znf235Q61116 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.12■□□□□ 0.33
Znf235Q61116 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Znf235Q61116 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Znf235Q61116 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Znf235Q61116 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Znf235Q61116 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Znf235Q61116 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Znf235Q61116 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Znf235Q61116 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Znf235Q61116 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Znf235Q61116 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Znf235Q61116 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.11■□□□□ 0.33
Znf235Q61116 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.11■□□□□ 0.33
Znf235Q61116 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Znf235Q61116 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Znf235Q61116 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Znf235Q61116 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Znf235Q61116 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Znf235Q61116 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Znf235Q61116 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Znf235Q61116 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Znf235Q61116 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Znf235Q61116 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.1■□□□□ 0.33
Znf235Q61116 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Znf235Q61116 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Znf235Q61116 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.1■□□□□ 0.33
Znf235Q61116 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Znf235Q61116 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.1■□□□□ 0.33
Znf235Q61116 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.1■□□□□ 0.33
Znf235Q61116 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.1■□□□□ 0.33
Znf235Q61116 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Znf235Q61116 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Znf235Q61116 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.1■□□□□ 0.33
Znf235Q61116 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.1■□□□□ 0.33
Znf235Q61116 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Znf235Q61116 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms