Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim43aQ3TL54 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim43aQ3TL54 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim43aQ3TL54 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim43aQ3TL54 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim43aQ3TL54 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim43aQ3TL54 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim43aQ3TL54 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim43aQ3TL54 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trim43aQ3TL54 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim43aQ3TL54 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.47■□□□□ 0.39
Trim43aQ3TL54 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.47■□□□□ 0.39
Trim43aQ3TL54 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim43aQ3TL54 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim43aQ3TL54 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim43aQ3TL54 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim43aQ3TL54 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim43aQ3TL54 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim43aQ3TL54 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim43aQ3TL54 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim43aQ3TL54 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trim43aQ3TL54 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim43aQ3TL54 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.46■□□□□ 0.39
Trim43aQ3TL54 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim43aQ3TL54 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Trim43aQ3TL54 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim43aQ3TL54 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim43aQ3TL54 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.46■□□□□ 0.39
Trim43aQ3TL54 Gm10698-201ENSMUST00000182663 604 ntBASIC17.46■□□□□ 0.39
Trim43aQ3TL54 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.46■□□□□ 0.39
Trim43aQ3TL54 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim43aQ3TL54 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trim43aQ3TL54 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim43aQ3TL54 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim43aQ3TL54 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim43aQ3TL54 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trim43aQ3TL54 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim43aQ3TL54 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim43aQ3TL54 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim43aQ3TL54 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.46■□□□□ 0.39
Trim43aQ3TL54 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim43aQ3TL54 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trim43aQ3TL54 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trim43aQ3TL54 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Trim43aQ3TL54 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trim43aQ3TL54 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43aQ3TL54 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.45■□□□□ 0.38
Trim43aQ3TL54 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43aQ3TL54 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43aQ3TL54 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43aQ3TL54 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43aQ3TL54 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43aQ3TL54 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.45■□□□□ 0.38
Trim43aQ3TL54 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.45■□□□□ 0.38
Trim43aQ3TL54 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43aQ3TL54 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43aQ3TL54 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43aQ3TL54 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.45■□□□□ 0.38
Trim43aQ3TL54 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43aQ3TL54 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43aQ3TL54 Mir1199-201ENSMUST00000117015 119 ntBASIC17.45■□□□□ 0.38
Trim43aQ3TL54 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43aQ3TL54 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43aQ3TL54 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43aQ3TL54 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43aQ3TL54 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43aQ3TL54 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43aQ3TL54 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43aQ3TL54 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.45■□□□□ 0.38
Trim43aQ3TL54 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43aQ3TL54 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
Trim43aQ3TL54 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim43aQ3TL54 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim43aQ3TL54 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim43aQ3TL54 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim43aQ3TL54 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.44■□□□□ 0.38
Trim43aQ3TL54 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Trim43aQ3TL54 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim43aQ3TL54 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trim43aQ3TL54 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trim43aQ3TL54 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim43aQ3TL54 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim43aQ3TL54 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim43aQ3TL54 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim43aQ3TL54 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.44■□□□□ 0.38
Trim43aQ3TL54 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trim43aQ3TL54 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim43aQ3TL54 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim43aQ3TL54 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Trim43aQ3TL54 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim43aQ3TL54 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim43aQ3TL54 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim43aQ3TL54 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim43aQ3TL54 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Trim43aQ3TL54 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim43aQ3TL54 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim43aQ3TL54 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim43aQ3TL54 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim43aQ3TL54 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Trim43aQ3TL54 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 106.6 ms