Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.79■□□□□ 0.28
Thumpd3P97770 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Thumpd3P97770 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Thumpd3P97770 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Thumpd3P97770 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Thumpd3P97770 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Thumpd3P97770 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.79■□□□□ 0.28
Thumpd3P97770 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.79■□□□□ 0.28
Thumpd3P97770 Gm4974-201ENSMUST00000209974 875 ntBASIC16.79■□□□□ 0.28
Thumpd3P97770 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Thumpd3P97770 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Thumpd3P97770 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Thumpd3P97770 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Thumpd3P97770 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Thumpd3P97770 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Thumpd3P97770 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Thumpd3P97770 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.79■□□□□ 0.28
Thumpd3P97770 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Thumpd3P97770 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Thumpd3P97770 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Thumpd3P97770 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Thumpd3P97770 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Thumpd3P97770 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.78■□□□□ 0.28
Thumpd3P97770 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Thumpd3P97770 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Thumpd3P97770 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Thumpd3P97770 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Thumpd3P97770 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Thumpd3P97770 Gm10231-201ENSMUST00000181584 441 ntBASIC16.78■□□□□ 0.28
Thumpd3P97770 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Thumpd3P97770 Gm3375-201ENSMUST00000203929 796 ntBASIC16.78■□□□□ 0.28
Thumpd3P97770 Gm10175-202ENSMUST00000208752 441 ntBASIC16.78■□□□□ 0.28
Thumpd3P97770 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Thumpd3P97770 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Thumpd3P97770 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Thumpd3P97770 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Thumpd3P97770 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Thumpd3P97770 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
Thumpd3P97770 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.78■□□□□ 0.28
Thumpd3P97770 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Thumpd3P97770 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Thumpd3P97770 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Thumpd3P97770 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Thumpd3P97770 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Thumpd3P97770 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Thumpd3P97770 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Thumpd3P97770 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Thumpd3P97770 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Thumpd3P97770 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Thumpd3P97770 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.77■□□□□ 0.28
Thumpd3P97770 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Thumpd3P97770 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Thumpd3P97770 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Thumpd3P97770 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.77■□□□□ 0.28
Thumpd3P97770 Gm11539-201ENSMUST00000119837 557 ntBASIC16.77■□□□□ 0.28
Thumpd3P97770 Gm13436-201ENSMUST00000120418 567 ntBASIC16.77■□□□□ 0.28
Thumpd3P97770 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.77■□□□□ 0.28
Thumpd3P97770 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.77■□□□□ 0.28
Thumpd3P97770 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Thumpd3P97770 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Thumpd3P97770 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Thumpd3P97770 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Thumpd3P97770 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Thumpd3P97770 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Thumpd3P97770 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Thumpd3P97770 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Thumpd3P97770 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Thumpd3P97770 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Thumpd3P97770 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Thumpd3P97770 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Thumpd3P97770 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Thumpd3P97770 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Thumpd3P97770 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Thumpd3P97770 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Thumpd3P97770 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Thumpd3P97770 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Thumpd3P97770 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Thumpd3P97770 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Thumpd3P97770 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Thumpd3P97770 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.76■□□□□ 0.27
Thumpd3P97770 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Thumpd3P97770 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Thumpd3P97770 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Thumpd3P97770 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Thumpd3P97770 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Thumpd3P97770 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Thumpd3P97770 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Thumpd3P97770 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.76■□□□□ 0.27
Thumpd3P97770 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Thumpd3P97770 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Thumpd3P97770 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Thumpd3P97770 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Thumpd3P97770 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Thumpd3P97770 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Thumpd3P97770 Gm13559-201ENSMUST00000120476 863 ntBASIC16.75■□□□□ 0.27
Thumpd3P97770 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Thumpd3P97770 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Thumpd3P97770 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Thumpd3P97770 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Thumpd3P97770 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms