Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Uspl1Q3ULM6 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC21.34■■□□□ 1.01
Uspl1Q3ULM6 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Uspl1Q3ULM6 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Uspl1Q3ULM6 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Uspl1Q3ULM6 Gm37166-201ENSMUST00000195473 2474 ntBASIC21.34■■□□□ 1.01
Uspl1Q3ULM6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC21.34■■□□□ 1.01
Uspl1Q3ULM6 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Uspl1Q3ULM6 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Uspl1Q3ULM6 Gm27704-201ENSMUST00000185094 107 ntBASIC21.34■■□□□ 1.01
Uspl1Q3ULM6 AC130713.1-201ENSMUST00000228853 1096 ntBASIC21.34■■□□□ 1.01
Uspl1Q3ULM6 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Uspl1Q3ULM6 Gm32996-201ENSMUST00000199828 1447 ntBASIC21.34■■□□□ 1.01
Uspl1Q3ULM6 Gm9889-202ENSMUST00000206983 1577 ntBASIC21.34■■□□□ 1.01
Uspl1Q3ULM6 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
Uspl1Q3ULM6 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Uspl1Q3ULM6 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Uspl1Q3ULM6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Uspl1Q3ULM6 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Uspl1Q3ULM6 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Uspl1Q3ULM6 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Uspl1Q3ULM6 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Uspl1Q3ULM6 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Uspl1Q3ULM6 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Uspl1Q3ULM6 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Uspl1Q3ULM6 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Uspl1Q3ULM6 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Uspl1Q3ULM6 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Uspl1Q3ULM6 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Uspl1Q3ULM6 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Uspl1Q3ULM6 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Uspl1Q3ULM6 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Uspl1Q3ULM6 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Uspl1Q3ULM6 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC21.32■■□□□ 1
Uspl1Q3ULM6 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Uspl1Q3ULM6 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC21.32■■□□□ 1
Uspl1Q3ULM6 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC21.32■■□□□ 1
Uspl1Q3ULM6 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Uspl1Q3ULM6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Uspl1Q3ULM6 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC21.32■■□□□ 1
Uspl1Q3ULM6 Gm28265-201ENSMUST00000188201 2319 ntBASIC21.32■■□□□ 1
Uspl1Q3ULM6 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Uspl1Q3ULM6 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Uspl1Q3ULM6 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Uspl1Q3ULM6 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC21.32■■□□□ 1
Uspl1Q3ULM6 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC21.32■■□□□ 1
Uspl1Q3ULM6 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC21.32■■□□□ 1
Uspl1Q3ULM6 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC21.32■■□□□ 1
Uspl1Q3ULM6 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC21.32■■□□□ 1
Uspl1Q3ULM6 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC21.32■■□□□ 1
Uspl1Q3ULM6 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Uspl1Q3ULM6 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Uspl1Q3ULM6 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC21.32■■□□□ 1
Uspl1Q3ULM6 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Uspl1Q3ULM6 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Uspl1Q3ULM6 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
Uspl1Q3ULM6 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Uspl1Q3ULM6 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Uspl1Q3ULM6 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Uspl1Q3ULM6 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC21.31■■□□□ 1
Uspl1Q3ULM6 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Uspl1Q3ULM6 Gm10052-201ENSMUST00000168019 960 ntBASIC21.31■■□□□ 1
Uspl1Q3ULM6 Gm27742-201ENSMUST00000184667 60 ntBASIC21.31■■□□□ 1
Uspl1Q3ULM6 Ighv6-1-201ENSMUST00000193612 343 ntBASIC21.31■■□□□ 1
Uspl1Q3ULM6 Gm7729-201ENSMUST00000050143 801 ntBASIC21.31■■□□□ 1
Uspl1Q3ULM6 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Uspl1Q3ULM6 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC21.31■■□□□ 1
Uspl1Q3ULM6 AC115863.1-201ENSMUST00000214815 1813 ntBASIC21.31■■□□□ 1
Uspl1Q3ULM6 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Uspl1Q3ULM6 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Uspl1Q3ULM6 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Uspl1Q3ULM6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Uspl1Q3ULM6 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Uspl1Q3ULM6 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Uspl1Q3ULM6 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Uspl1Q3ULM6 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC21.3■■□□□ 1
Uspl1Q3ULM6 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC21.3■■□□□ 1
Uspl1Q3ULM6 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC21.3■■□□□ 1
Uspl1Q3ULM6 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Uspl1Q3ULM6 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Uspl1Q3ULM6 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Uspl1Q3ULM6 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Uspl1Q3ULM6 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC21.3■■□□□ 1
Uspl1Q3ULM6 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Uspl1Q3ULM6 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Uspl1Q3ULM6 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Uspl1Q3ULM6 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC21.3■■□□□ 1
Uspl1Q3ULM6 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Uspl1Q3ULM6 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Uspl1Q3ULM6 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Uspl1Q3ULM6 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
Uspl1Q3ULM6 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Uspl1Q3ULM6 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Uspl1Q3ULM6 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Uspl1Q3ULM6 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Uspl1Q3ULM6 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Uspl1Q3ULM6 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Uspl1Q3ULM6 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC21.29■■□□□ 1
Uspl1Q3ULM6 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC21.29■■□□□ 1
Uspl1Q3ULM6 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms