Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim43aQ3TL54 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim43aQ3TL54 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim43aQ3TL54 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim43aQ3TL54 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim43aQ3TL54 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim43aQ3TL54 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim43aQ3TL54 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim43aQ3TL54 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43aQ3TL54 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43aQ3TL54 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43aQ3TL54 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43aQ3TL54 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43aQ3TL54 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trim43aQ3TL54 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43aQ3TL54 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43aQ3TL54 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43aQ3TL54 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43aQ3TL54 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43aQ3TL54 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Trim43aQ3TL54 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43aQ3TL54 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43aQ3TL54 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43aQ3TL54 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43aQ3TL54 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43aQ3TL54 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43aQ3TL54 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43aQ3TL54 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trim43aQ3TL54 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.56■□□□□ 0.4
Trim43aQ3TL54 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trim43aQ3TL54 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43aQ3TL54 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43aQ3TL54 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43aQ3TL54 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim43aQ3TL54 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.56■□□□□ 0.4
Trim43aQ3TL54 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43aQ3TL54 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43aQ3TL54 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43aQ3TL54 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43aQ3TL54 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43aQ3TL54 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trim43aQ3TL54 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43aQ3TL54 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43aQ3TL54 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43aQ3TL54 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43aQ3TL54 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Trim43aQ3TL54 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim43aQ3TL54 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim43aQ3TL54 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.55■□□□□ 0.4
Trim43aQ3TL54 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trim43aQ3TL54 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.55■□□□□ 0.4
Trim43aQ3TL54 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.55■□□□□ 0.4
Trim43aQ3TL54 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim43aQ3TL54 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trim43aQ3TL54 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim43aQ3TL54 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.55■□□□□ 0.4
Trim43aQ3TL54 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trim43aQ3TL54 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim43aQ3TL54 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim43aQ3TL54 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Trim43aQ3TL54 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trim43aQ3TL54 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43aQ3TL54 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43aQ3TL54 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43aQ3TL54 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43aQ3TL54 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.54■□□□□ 0.4
Trim43aQ3TL54 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43aQ3TL54 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43aQ3TL54 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Trim43aQ3TL54 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43aQ3TL54 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43aQ3TL54 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43aQ3TL54 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.54■□□□□ 0.4
Trim43aQ3TL54 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.54■□□□□ 0.4
Trim43aQ3TL54 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.54■□□□□ 0.4
Trim43aQ3TL54 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43aQ3TL54 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43aQ3TL54 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43aQ3TL54 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43aQ3TL54 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43aQ3TL54 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43aQ3TL54 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43aQ3TL54 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43aQ3TL54 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.53■□□□□ 0.4
Trim43aQ3TL54 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43aQ3TL54 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Trim43aQ3TL54 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43aQ3TL54 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Trim43aQ3TL54 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.53■□□□□ 0.4
Trim43aQ3TL54 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trim43aQ3TL54 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.53■□□□□ 0.4
Trim43aQ3TL54 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.53■□□□□ 0.4
Trim43aQ3TL54 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.53■□□□□ 0.4
Trim43aQ3TL54 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43aQ3TL54 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43aQ3TL54 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Trim43aQ3TL54 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43aQ3TL54 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trim43aQ3TL54 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43aQ3TL54 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 98.4 ms