Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Thumpd3P97770 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Thumpd3P97770 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Thumpd3P97770 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Thumpd3P97770 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Thumpd3P97770 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Thumpd3P97770 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Thumpd3P97770 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Thumpd3P97770 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Thumpd3P97770 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Thumpd3P97770 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Thumpd3P97770 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Thumpd3P97770 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Thumpd3P97770 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Thumpd3P97770 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Thumpd3P97770 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Thumpd3P97770 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Thumpd3P97770 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Thumpd3P97770 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Thumpd3P97770 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Thumpd3P97770 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.86■□□□□ 0.29
Thumpd3P97770 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Thumpd3P97770 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Thumpd3P97770 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Thumpd3P97770 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Thumpd3P97770 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Thumpd3P97770 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Thumpd3P97770 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.86■□□□□ 0.29
Thumpd3P97770 Gm6433-201ENSMUST00000118634 875 ntBASIC16.86■□□□□ 0.29
Thumpd3P97770 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.86■□□□□ 0.29
Thumpd3P97770 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.86■□□□□ 0.29
Thumpd3P97770 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.86■□□□□ 0.29
Thumpd3P97770 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Thumpd3P97770 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Thumpd3P97770 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Thumpd3P97770 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Thumpd3P97770 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Thumpd3P97770 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Thumpd3P97770 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Thumpd3P97770 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Thumpd3P97770 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Thumpd3P97770 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Thumpd3P97770 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Thumpd3P97770 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Thumpd3P97770 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Thumpd3P97770 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Thumpd3P97770 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Thumpd3P97770 Gm21814-202ENSMUST00000203277 873 ntBASIC16.85■□□□□ 0.29
Thumpd3P97770 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.85■□□□□ 0.29
Thumpd3P97770 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.85■□□□□ 0.29
Thumpd3P97770 Timm23-208ENSMUST00000226683 750 ntBASIC16.85■□□□□ 0.29
Thumpd3P97770 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Thumpd3P97770 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Thumpd3P97770 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Thumpd3P97770 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Thumpd3P97770 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Thumpd3P97770 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Thumpd3P97770 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Thumpd3P97770 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Thumpd3P97770 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Thumpd3P97770 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.85■□□□□ 0.29
Thumpd3P97770 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Thumpd3P97770 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Thumpd3P97770 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Thumpd3P97770 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Thumpd3P97770 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.84■□□□□ 0.29
Thumpd3P97770 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Thumpd3P97770 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.84■□□□□ 0.29
Thumpd3P97770 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Thumpd3P97770 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Thumpd3P97770 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Thumpd3P97770 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Thumpd3P97770 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Thumpd3P97770 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Thumpd3P97770 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Thumpd3P97770 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Thumpd3P97770 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Thumpd3P97770 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Thumpd3P97770 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Thumpd3P97770 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Thumpd3P97770 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Thumpd3P97770 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Thumpd3P97770 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Thumpd3P97770 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Thumpd3P97770 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Thumpd3P97770 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Thumpd3P97770 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Thumpd3P97770 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Thumpd3P97770 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
Thumpd3P97770 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Thumpd3P97770 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
Thumpd3P97770 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Thumpd3P97770 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Thumpd3P97770 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Thumpd3P97770 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Thumpd3P97770 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Thumpd3P97770 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Thumpd3P97770 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Thumpd3P97770 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Thumpd3P97770 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 1244.4 ms