Protein–RNA interactions for Protein: A0A0G2JDV4

Igkv5-39, Immunoglobulin kappa variable 5-39 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-39A0A0G2JDV4 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.5■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.49■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.49■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-39A0A0G2JDV4 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.48■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv5-39A0A0G2JDV4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.48■□□□□ 0.23
Igkv5-39A0A0G2JDV4 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.47■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.47■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.47■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv5-39A0A0G2JDV4 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.47■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv5-39A0A0G2JDV4 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.46■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.46■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.46■□□□□ 0.23
Igkv5-39A0A0G2JDV4 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.46■□□□□ 0.23
Igkv5-39A0A0G2JDV4 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.46■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.46■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.46■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Igkv5-39A0A0G2JDV4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.45■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms