Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 RN7SKP15-201ENST00000364742 309 ntBASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 AC115283.1-201ENST00000427353 400 ntBASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 USP24P1-201ENST00000433802 779 ntBASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 HSPE1P28-201ENST00000443139 211 ntBASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 SNRPBP1-201ENST00000443634 282 ntBASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 GAPDHP20-201ENST00000444107 1007 ntBASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 AL121578.2-201ENST00000448797 447 ntBASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 VN1R38P-201ENST00000450265 887 ntBASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 AC006512.1-201ENST00000468816 291 ntBASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 TXNP6-201ENST00000510190 310 ntBASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 NARSP2-201ENST00000518524 679 ntBASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 MRPS16P1-201ENST00000523462 412 ntBASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 CASP1-212ENST00000531166 300 ntTSL 5 BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 AC007068.2-201ENST00000543168 395 ntBASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 NCAPGP2-201ENST00000557911 754 ntBASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 MIR3146-201ENST00000580367 79 ntBASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 7SK.7-201ENST00000603504 247 ntBASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 OR1N1-202ENST00000619659 939 ntBASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 AC120057.5-201ENST00000623840 154 ntBASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 AC134882.1-201ENST00000603738 1676 ntBASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 AC012618.3-205ENST00000637896 1496 ntBASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 AC119674.1-204ENST00000641348 1343 ntBASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 Y_RNA.197-201ENST00000364004 102 ntBASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 Y_RNA.301-201ENST00000364990 103 ntBASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 RNA5SP85-201ENST00000365378 119 ntBASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 MIR649-201ENST00000384843 97 ntBASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 AC016769.3-201ENST00000396562 315 ntBASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 MIR541-201ENST00000401360 84 ntBASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 AL592114.1-201ENST00000403842 483 ntBASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 Y_RNA.605-201ENST00000410577 105 ntBASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 RPL36AP36-201ENST00000418616 301 ntBASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 RPL34P3-201ENST00000421454 338 ntBASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 AL645939.3-201ENST00000435408 225 ntBASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 ARL2BPP10-201ENST00000446487 531 ntBASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 AK3P4-201ENST00000504283 583 ntBASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 AC022634.1-201ENST00000520765 532 ntBASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 SUMO2P20-201ENST00000520803 283 ntBASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 AP000907.2-201ENST00000530827 353 ntBASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 AC026826.3-201ENST00000561747 158 ntBASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 AP001029.3-201ENST00000588063 596 ntBASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 CYP2C61P-201ENST00000604072 290 ntBASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 APOOP1-201ENST00000604695 592 ntBASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.79□□□□□ -1.32
PCDHB9Q9Y5E1 AC015982.1-201ENST00000608113 465 ntBASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 151.5 ms