Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mre11Q61216 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mre11Q61216 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mre11Q61216 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.98■□□□□ 0.79
Mre11Q61216 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Mre11Q61216 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Mre11Q61216 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.98■□□□□ 0.79
Mre11Q61216 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.98■□□□□ 0.79
Mre11Q61216 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mre11Q61216 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Mre11Q61216 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mre11Q61216 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mre11Q61216 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mre11Q61216 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Mre11Q61216 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Mre11Q61216 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Mre11Q61216 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Mre11Q61216 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Mre11Q61216 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Mre11Q61216 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Mre11Q61216 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Mre11Q61216 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Mre11Q61216 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Mre11Q61216 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.97■□□□□ 0.79
Mre11Q61216 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Mre11Q61216 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Mre11Q61216 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Mre11Q61216 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC19.97■□□□□ 0.79
Mre11Q61216 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Mre11Q61216 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.97■□□□□ 0.79
Mre11Q61216 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Mre11Q61216 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Mre11Q61216 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Mre11Q61216 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Mre11Q61216 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Mre11Q61216 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Mre11Q61216 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Mre11Q61216 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Mre11Q61216 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Mre11Q61216 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Mre11Q61216 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Mre11Q61216 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Mre11Q61216 Gm37444-201ENSMUST00000193605 439 ntBASIC19.96■□□□□ 0.79
Mre11Q61216 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Mre11Q61216 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.96■□□□□ 0.79
Mre11Q61216 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Mre11Q61216 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Mre11Q61216 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Mre11Q61216 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Mre11Q61216 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Mre11Q61216 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Mre11Q61216 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Mre11Q61216 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Mre11Q61216 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC19.95■□□□□ 0.78
Mre11Q61216 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Mre11Q61216 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Mre11Q61216 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Mre11Q61216 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Mre11Q61216 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.95■□□□□ 0.78
Mre11Q61216 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Mre11Q61216 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Mre11Q61216 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Mre11Q61216 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Mre11Q61216 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Mre11Q61216 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Mre11Q61216 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Mre11Q61216 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Mre11Q61216 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Mre11Q61216 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Mre11Q61216 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Mre11Q61216 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Mre11Q61216 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC19.94■□□□□ 0.78
Mre11Q61216 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Mre11Q61216 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Mre11Q61216 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Mre11Q61216 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Mre11Q61216 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Mre11Q61216 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Mre11Q61216 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Mre11Q61216 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Mre11Q61216 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Mre11Q61216 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Mre11Q61216 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Mre11Q61216 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Mre11Q61216 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Mre11Q61216 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Mre11Q61216 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Mre11Q61216 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Mre11Q61216 Gm42473-201ENSMUST00000201056 2291 ntBASIC19.93■□□□□ 0.78
Mre11Q61216 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Mre11Q61216 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Mre11Q61216 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Mre11Q61216 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Mre11Q61216 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Mre11Q61216 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mre11Q61216 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mre11Q61216 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Mre11Q61216 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mre11Q61216 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mre11Q61216 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms