Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Znf235Q61116 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Znf235Q61116 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Znf235Q61116 Gm15165-201ENSMUST00000118140 502 ntBASIC17.34■□□□□ 0.37
Znf235Q61116 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.34■□□□□ 0.37
Znf235Q61116 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Znf235Q61116 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Znf235Q61116 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Znf235Q61116 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Znf235Q61116 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Znf235Q61116 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Znf235Q61116 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Znf235Q61116 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Znf235Q61116 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Znf235Q61116 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Znf235Q61116 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Znf235Q61116 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Znf235Q61116 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Znf235Q61116 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Znf235Q61116 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Znf235Q61116 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Znf235Q61116 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.33■□□□□ 0.36
Znf235Q61116 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.33■□□□□ 0.36
Znf235Q61116 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.33■□□□□ 0.36
Znf235Q61116 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.33■□□□□ 0.36
Znf235Q61116 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.33■□□□□ 0.36
Znf235Q61116 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Znf235Q61116 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Znf235Q61116 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Znf235Q61116 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Znf235Q61116 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Znf235Q61116 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Znf235Q61116 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.32■□□□□ 0.36
Znf235Q61116 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.32■□□□□ 0.36
Znf235Q61116 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Znf235Q61116 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Znf235Q61116 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Znf235Q61116 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Znf235Q61116 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Znf235Q61116 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Znf235Q61116 Gm12644-201ENSMUST00000119935 606 ntBASIC17.32■□□□□ 0.36
Znf235Q61116 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Znf235Q61116 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.32■□□□□ 0.36
Znf235Q61116 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.32■□□□□ 0.36
Znf235Q61116 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Znf235Q61116 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Znf235Q61116 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Znf235Q61116 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Znf235Q61116 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Znf235Q61116 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Znf235Q61116 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Znf235Q61116 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Znf235Q61116 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Znf235Q61116 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Znf235Q61116 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Znf235Q61116 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Znf235Q61116 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.31■□□□□ 0.36
Znf235Q61116 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.31■□□□□ 0.36
Znf235Q61116 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.31■□□□□ 0.36
Znf235Q61116 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Znf235Q61116 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Znf235Q61116 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Znf235Q61116 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Znf235Q61116 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Znf235Q61116 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Znf235Q61116 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.3■□□□□ 0.36
Znf235Q61116 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Znf235Q61116 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Znf235Q61116 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Znf235Q61116 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Znf235Q61116 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Znf235Q61116 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Znf235Q61116 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Znf235Q61116 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.3■□□□□ 0.36
Znf235Q61116 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.3■□□□□ 0.36
Znf235Q61116 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.3■□□□□ 0.36
Znf235Q61116 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Znf235Q61116 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Znf235Q61116 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Znf235Q61116 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Znf235Q61116 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Znf235Q61116 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Znf235Q61116 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Znf235Q61116 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Znf235Q61116 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Znf235Q61116 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Znf235Q61116 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Znf235Q61116 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Znf235Q61116 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Znf235Q61116 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Znf235Q61116 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Znf235Q61116 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Znf235Q61116 Gm13884-201ENSMUST00000118103 829 ntBASIC17.29■□□□□ 0.36
Znf235Q61116 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Znf235Q61116 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Znf235Q61116 Gm5864-201ENSMUST00000202263 970 ntBASIC17.29■□□□□ 0.36
Znf235Q61116 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.29■□□□□ 0.36
Znf235Q61116 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.29■□□□□ 0.36
Znf235Q61116 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.29■□□□□ 0.36
Znf235Q61116 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms