Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgn5Q9JL35 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgn5Q9JL35 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgn5Q9JL35 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Hmgn5Q9JL35 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Hmgn5Q9JL35 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgn5Q9JL35 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgn5Q9JL35 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgn5Q9JL35 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgn5Q9JL35 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgn5Q9JL35 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.82■□□□□ 0.6
Hmgn5Q9JL35 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Hmgn5Q9JL35 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgn5Q9JL35 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgn5Q9JL35 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgn5Q9JL35 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgn5Q9JL35 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgn5Q9JL35 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgn5Q9JL35 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgn5Q9JL35 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgn5Q9JL35 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgn5Q9JL35 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgn5Q9JL35 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgn5Q9JL35 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgn5Q9JL35 Gm5408-201ENSMUST00000197998 747 ntBASIC18.81■□□□□ 0.6
Hmgn5Q9JL35 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgn5Q9JL35 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgn5Q9JL35 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.81■□□□□ 0.6
Hmgn5Q9JL35 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
Hmgn5Q9JL35 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgn5Q9JL35 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgn5Q9JL35 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgn5Q9JL35 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgn5Q9JL35 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgn5Q9JL35 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgn5Q9JL35 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgn5Q9JL35 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgn5Q9JL35 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgn5Q9JL35 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgn5Q9JL35 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgn5Q9JL35 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgn5Q9JL35 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Hmgn5Q9JL35 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.8■□□□□ 0.6
Hmgn5Q9JL35 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.8■□□□□ 0.6
Hmgn5Q9JL35 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgn5Q9JL35 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgn5Q9JL35 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.8■□□□□ 0.6
Hmgn5Q9JL35 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgn5Q9JL35 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.8■□□□□ 0.6
Hmgn5Q9JL35 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgn5Q9JL35 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Hmgn5Q9JL35 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Hmgn5Q9JL35 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgn5Q9JL35 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Hmgn5Q9JL35 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgn5Q9JL35 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgn5Q9JL35 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Hmgn5Q9JL35 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgn5Q9JL35 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgn5Q9JL35 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgn5Q9JL35 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.79■□□□□ 0.6
Hmgn5Q9JL35 Gm15375-201ENSMUST00000119510 849 ntBASIC18.79■□□□□ 0.6
Hmgn5Q9JL35 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgn5Q9JL35 Gm26524-201ENSMUST00000192339 390 ntBASIC18.79■□□□□ 0.6
Hmgn5Q9JL35 AV356131-201ENSMUST00000206201 750 ntBASIC18.79■□□□□ 0.6
Hmgn5Q9JL35 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgn5Q9JL35 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Hmgn5Q9JL35 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.79■□□□□ 0.6
Hmgn5Q9JL35 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgn5Q9JL35 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.79■□□□□ 0.6
Hmgn5Q9JL35 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgn5Q9JL35 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgn5Q9JL35 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgn5Q9JL35 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgn5Q9JL35 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgn5Q9JL35 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgn5Q9JL35 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgn5Q9JL35 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Hmgn5Q9JL35 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Hmgn5Q9JL35 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgn5Q9JL35 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgn5Q9JL35 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Hmgn5Q9JL35 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Hmgn5Q9JL35 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgn5Q9JL35 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgn5Q9JL35 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgn5Q9JL35 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgn5Q9JL35 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgn5Q9JL35 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgn5Q9JL35 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgn5Q9JL35 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgn5Q9JL35 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.78■□□□□ 0.6
Hmgn5Q9JL35 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Hmgn5Q9JL35 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgn5Q9JL35 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.78■□□□□ 0.6
Hmgn5Q9JL35 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgn5Q9JL35 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Hmgn5Q9JL35 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgn5Q9JL35 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.78■□□□□ 0.6
Hmgn5Q9JL35 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms