Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.72■□□□□ 0.43
Trim43aQ3TL54 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim43aQ3TL54 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim43aQ3TL54 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim43aQ3TL54 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim43aQ3TL54 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim43aQ3TL54 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim43aQ3TL54 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim43aQ3TL54 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim43aQ3TL54 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trim43aQ3TL54 Gm5643-201ENSMUST00000117081 966 ntBASIC17.71■□□□□ 0.43
Trim43aQ3TL54 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trim43aQ3TL54 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.71■□□□□ 0.43
Trim43aQ3TL54 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim43aQ3TL54 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Trim43aQ3TL54 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trim43aQ3TL54 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim43aQ3TL54 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim43aQ3TL54 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim43aQ3TL54 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim43aQ3TL54 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trim43aQ3TL54 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trim43aQ3TL54 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim43aQ3TL54 Gm13158-201ENSMUST00000122007 736 ntBASIC17.7■□□□□ 0.42
Trim43aQ3TL54 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim43aQ3TL54 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.7■□□□□ 0.42
Trim43aQ3TL54 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
Trim43aQ3TL54 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim43aQ3TL54 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim43aQ3TL54 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim43aQ3TL54 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43aQ3TL54 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43aQ3TL54 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43aQ3TL54 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trim43aQ3TL54 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43aQ3TL54 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Trim43aQ3TL54 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43aQ3TL54 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.69■□□□□ 0.42
Trim43aQ3TL54 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43aQ3TL54 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43aQ3TL54 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43aQ3TL54 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43aQ3TL54 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.69■□□□□ 0.42
Trim43aQ3TL54 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43aQ3TL54 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.69■□□□□ 0.42
Trim43aQ3TL54 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.69■□□□□ 0.42
Trim43aQ3TL54 Gm10517-202ENSMUST00000192970 758 ntBASIC17.69■□□□□ 0.42
Trim43aQ3TL54 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.69■□□□□ 0.42
Trim43aQ3TL54 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43aQ3TL54 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43aQ3TL54 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43aQ3TL54 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43aQ3TL54 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43aQ3TL54 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43aQ3TL54 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43aQ3TL54 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43aQ3TL54 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43aQ3TL54 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43aQ3TL54 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43aQ3TL54 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43aQ3TL54 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43aQ3TL54 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43aQ3TL54 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43aQ3TL54 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43aQ3TL54 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.68■□□□□ 0.42
Trim43aQ3TL54 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43aQ3TL54 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43aQ3TL54 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43aQ3TL54 Gm17661-201ENSMUST00000170317 270 ntBASIC17.68■□□□□ 0.42
Trim43aQ3TL54 Gm27275-201ENSMUST00000184318 272 ntBASIC17.68■□□□□ 0.42
Trim43aQ3TL54 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43aQ3TL54 Gm37292-201ENSMUST00000192062 758 ntBASIC17.68■□□□□ 0.42
Trim43aQ3TL54 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Trim43aQ3TL54 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trim43aQ3TL54 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.68■□□□□ 0.42
Trim43aQ3TL54 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43aQ3TL54 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43aQ3TL54 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.67■□□□□ 0.42
Trim43aQ3TL54 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Trim43aQ3TL54 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43aQ3TL54 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.67■□□□□ 0.42
Trim43aQ3TL54 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43aQ3TL54 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43aQ3TL54 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43aQ3TL54 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43aQ3TL54 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.67■□□□□ 0.42
Trim43aQ3TL54 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trim43aQ3TL54 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.67■□□□□ 0.42
Trim43aQ3TL54 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43aQ3TL54 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43aQ3TL54 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.67■□□□□ 0.42
Trim43aQ3TL54 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.67■□□□□ 0.42
Trim43aQ3TL54 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trim43aQ3TL54 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43aQ3TL54 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43aQ3TL54 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43aQ3TL54 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43aQ3TL54 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43aQ3TL54 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim43aQ3TL54 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms