Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Rtl1Q7M732 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
Rtl1Q7M732 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC29.66■■■□□ 2.34
Rtl1Q7M732 Slc35b2-202ENSMUST00000223987 1766 ntBASIC29.66■■■□□ 2.34
Rtl1Q7M732 Gm15372-201ENSMUST00000120729 834 ntBASIC29.66■■■□□ 2.34
Rtl1Q7M732 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC29.66■■■□□ 2.34
Rtl1Q7M732 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Rtl1Q7M732 Gm7461-201ENSMUST00000058918 827 ntBASIC29.66■■■□□ 2.34
Rtl1Q7M732 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Rtl1Q7M732 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC29.66■■■□□ 2.34
Rtl1Q7M732 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Rtl1Q7M732 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC29.65■■■□□ 2.34
Rtl1Q7M732 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Rtl1Q7M732 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Rtl1Q7M732 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
Rtl1Q7M732 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
Rtl1Q7M732 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC29.65■■■□□ 2.34
Rtl1Q7M732 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Rtl1Q7M732 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC29.64■■■□□ 2.34
Rtl1Q7M732 Gm45244-201ENSMUST00000211328 2200 ntBASIC29.64■■■□□ 2.34
Rtl1Q7M732 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC29.64■■■□□ 2.34
Rtl1Q7M732 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC29.64■■■□□ 2.34
Rtl1Q7M732 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Rtl1Q7M732 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Rtl1Q7M732 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
Rtl1Q7M732 Gm12644-201ENSMUST00000119935 606 ntBASIC29.64■■■□□ 2.34
Rtl1Q7M732 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
Rtl1Q7M732 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC29.63■■■□□ 2.33
Rtl1Q7M732 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Rtl1Q7M732 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Rtl1Q7M732 Gm7935-201ENSMUST00000100555 1278 ntBASIC29.63■■■□□ 2.33
Rtl1Q7M732 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
Rtl1Q7M732 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Rtl1Q7M732 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Rtl1Q7M732 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Rtl1Q7M732 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Rtl1Q7M732 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC29.63■■■□□ 2.33
Rtl1Q7M732 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Rtl1Q7M732 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Rtl1Q7M732 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
Rtl1Q7M732 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC29.63■■■□□ 2.33
Rtl1Q7M732 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC29.63■■■□□ 2.33
Rtl1Q7M732 Gm12895-201ENSMUST00000122214 226 ntBASIC29.62■■■□□ 2.33
Rtl1Q7M732 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Rtl1Q7M732 Gm44357-201ENSMUST00000195897 142 ntBASIC29.62■■■□□ 2.33
Rtl1Q7M732 Gm19658-201ENSMUST00000196231 138 ntBASIC29.62■■■□□ 2.33
Rtl1Q7M732 Gm44367-201ENSMUST00000196836 138 ntBASIC29.62■■■□□ 2.33
Rtl1Q7M732 Gm44350-201ENSMUST00000197197 138 ntBASIC29.62■■■□□ 2.33
Rtl1Q7M732 Gm44390-201ENSMUST00000197533 144 ntBASIC29.62■■■□□ 2.33
Rtl1Q7M732 Gm44313-201ENSMUST00000198018 138 ntBASIC29.62■■■□□ 2.33
Rtl1Q7M732 Gm44486-201ENSMUST00000198508 138 ntBASIC29.62■■■□□ 2.33
Rtl1Q7M732 Gm44454-201ENSMUST00000198541 138 ntBASIC29.62■■■□□ 2.33
Rtl1Q7M732 Gm44314-201ENSMUST00000199263 138 ntBASIC29.62■■■□□ 2.33
Rtl1Q7M732 Gm44394-201ENSMUST00000199558 138 ntBASIC29.62■■■□□ 2.33
Rtl1Q7M732 Gm44484-201ENSMUST00000199873 138 ntBASIC29.62■■■□□ 2.33
Rtl1Q7M732 Gm44466-201ENSMUST00000200264 138 ntBASIC29.62■■■□□ 2.33
Rtl1Q7M732 Gm44359-201ENSMUST00000200671 138 ntBASIC29.62■■■□□ 2.33
Rtl1Q7M732 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC29.62■■■□□ 2.33
Rtl1Q7M732 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC29.62■■■□□ 2.33
Rtl1Q7M732 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Rtl1Q7M732 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
Rtl1Q7M732 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC29.62■■■□□ 2.33
Rtl1Q7M732 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Rtl1Q7M732 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC29.62■■■□□ 2.33
Rtl1Q7M732 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC29.62■■■□□ 2.33
Rtl1Q7M732 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC29.62■■■□□ 2.33
Rtl1Q7M732 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC29.62■■■□□ 2.33
Rtl1Q7M732 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC29.62■■■□□ 2.33
Rtl1Q7M732 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC29.61■■■□□ 2.33
Rtl1Q7M732 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC29.61■■■□□ 2.33
Rtl1Q7M732 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC29.61■■■□□ 2.33
Rtl1Q7M732 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Rtl1Q7M732 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC29.61■■■□□ 2.33
Rtl1Q7M732 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC29.61■■■□□ 2.33
Rtl1Q7M732 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Rtl1Q7M732 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Rtl1Q7M732 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC29.6■■■□□ 2.33
Rtl1Q7M732 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Rtl1Q7M732 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Rtl1Q7M732 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Rtl1Q7M732 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC29.6■■■□□ 2.33
Rtl1Q7M732 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC29.6■■■□□ 2.33
Rtl1Q7M732 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Rtl1Q7M732 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Rtl1Q7M732 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Rtl1Q7M732 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC29.59■■■□□ 2.33
Rtl1Q7M732 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
Rtl1Q7M732 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC29.59■■■□□ 2.33
Rtl1Q7M732 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC29.59■■■□□ 2.33
Rtl1Q7M732 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC29.59■■■□□ 2.33
Rtl1Q7M732 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Rtl1Q7M732 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Rtl1Q7M732 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Rtl1Q7M732 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Rtl1Q7M732 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Rtl1Q7M732 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC29.59■■■□□ 2.33
Rtl1Q7M732 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Rtl1Q7M732 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC29.58■■■□□ 2.33
Rtl1Q7M732 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Rtl1Q7M732 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms