Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC20.1■□□□□ 0.81
Mre11Q61216 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mre11Q61216 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mre11Q61216 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Mre11Q61216 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mre11Q61216 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Mre11Q61216 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mre11Q61216 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.1■□□□□ 0.81
Mre11Q61216 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Mre11Q61216 Zfp783-201ENSMUST00000095946 670 ntBASIC20.1■□□□□ 0.81
Mre11Q61216 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mre11Q61216 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mre11Q61216 Ccdc166-201ENSMUST00000182172 2584 ntBASIC20.1■□□□□ 0.81
Mre11Q61216 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mre11Q61216 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Mre11Q61216 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mre11Q61216 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mre11Q61216 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mre11Q61216 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mre11Q61216 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Mre11Q61216 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mre11Q61216 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mre11Q61216 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mre11Q61216 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mre11Q61216 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mre11Q61216 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Mre11Q61216 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Mre11Q61216 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.09■□□□□ 0.81
Mre11Q61216 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.09■□□□□ 0.81
Mre11Q61216 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Mre11Q61216 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mre11Q61216 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mre11Q61216 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mre11Q61216 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mre11Q61216 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Mre11Q61216 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Mre11Q61216 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
Mre11Q61216 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Mre11Q61216 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.08■□□□□ 0.81
Mre11Q61216 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Mre11Q61216 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Mre11Q61216 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Mre11Q61216 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Mre11Q61216 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Mre11Q61216 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Mre11Q61216 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Mre11Q61216 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Mre11Q61216 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Mre11Q61216 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mre11Q61216 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mre11Q61216 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.07■□□□□ 0.8
Mre11Q61216 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mre11Q61216 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Mre11Q61216 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.07■□□□□ 0.8
Mre11Q61216 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mre11Q61216 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mre11Q61216 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mre11Q61216 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC20.07■□□□□ 0.8
Mre11Q61216 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Mre11Q61216 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mre11Q61216 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mre11Q61216 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mre11Q61216 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mre11Q61216 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mre11Q61216 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mre11Q61216 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Mre11Q61216 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mre11Q61216 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Mre11Q61216 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.06■□□□□ 0.8
Mre11Q61216 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Mre11Q61216 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mre11Q61216 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Mre11Q61216 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.06■□□□□ 0.8
Mre11Q61216 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mre11Q61216 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mre11Q61216 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Mre11Q61216 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Mre11Q61216 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mre11Q61216 Ntrk2-205ENSMUST00000224402 2284 ntBASIC20.06■□□□□ 0.8
Mre11Q61216 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mre11Q61216 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mre11Q61216 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mre11Q61216 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Mre11Q61216 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mre11Q61216 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mre11Q61216 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Mre11Q61216 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
Mre11Q61216 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.05■□□□□ 0.8
Mre11Q61216 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mre11Q61216 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mre11Q61216 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mre11Q61216 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mre11Q61216 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mre11Q61216 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mre11Q61216 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mre11Q61216 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Mre11Q61216 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mre11Q61216 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mre11Q61216 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mre11Q61216 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms