Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.62■■□□□ 1.37
H2afb2S4R1M3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
H2afb2S4R1M3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
H2afb2S4R1M3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
H2afb2S4R1M3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
H2afb2S4R1M3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
H2afb2S4R1M3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.6■■□□□ 1.37
H2afb2S4R1M3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
H2afb2S4R1M3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
H2afb2S4R1M3 Nkain2-201ENSMUST00000092602 558 ntBASIC23.58■■□□□ 1.37
H2afb2S4R1M3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
H2afb2S4R1M3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23.57■■□□□ 1.36
H2afb2S4R1M3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.57■■□□□ 1.36
H2afb2S4R1M3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
H2afb2S4R1M3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
H2afb2S4R1M3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
H2afb2S4R1M3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
H2afb2S4R1M3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC23.55■■□□□ 1.36
H2afb2S4R1M3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
H2afb2S4R1M3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
H2afb2S4R1M3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
H2afb2S4R1M3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
H2afb2S4R1M3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.54■■□□□ 1.36
H2afb2S4R1M3 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.54■■□□□ 1.36
H2afb2S4R1M3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.54■■□□□ 1.36
H2afb2S4R1M3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
H2afb2S4R1M3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
H2afb2S4R1M3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
H2afb2S4R1M3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
H2afb2S4R1M3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.53■■□□□ 1.36
H2afb2S4R1M3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
H2afb2S4R1M3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
H2afb2S4R1M3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
H2afb2S4R1M3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.52■■□□□ 1.36
H2afb2S4R1M3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.52■■□□□ 1.36
H2afb2S4R1M3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
H2afb2S4R1M3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
H2afb2S4R1M3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.52■■□□□ 1.35
H2afb2S4R1M3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
H2afb2S4R1M3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
H2afb2S4R1M3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
H2afb2S4R1M3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
H2afb2S4R1M3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
H2afb2S4R1M3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
H2afb2S4R1M3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.49■■□□□ 1.35
H2afb2S4R1M3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.49■■□□□ 1.35
H2afb2S4R1M3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.49■■□□□ 1.35
H2afb2S4R1M3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
H2afb2S4R1M3 Gm9939-201ENSMUST00000067161 1154 ntBASIC23.47■■□□□ 1.35
H2afb2S4R1M3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
H2afb2S4R1M3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
H2afb2S4R1M3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
H2afb2S4R1M3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
H2afb2S4R1M3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.44■■□□□ 1.34
H2afb2S4R1M3 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.44■■□□□ 1.34
H2afb2S4R1M3 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.44■■□□□ 1.34
H2afb2S4R1M3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
H2afb2S4R1M3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.43■■□□□ 1.34
H2afb2S4R1M3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
H2afb2S4R1M3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
H2afb2S4R1M3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
H2afb2S4R1M3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.42■■□□□ 1.34
H2afb2S4R1M3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
H2afb2S4R1M3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
H2afb2S4R1M3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.42■■□□□ 1.34
H2afb2S4R1M3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
H2afb2S4R1M3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
H2afb2S4R1M3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
H2afb2S4R1M3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.4■■□□□ 1.34
H2afb2S4R1M3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
H2afb2S4R1M3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.4■■□□□ 1.34
H2afb2S4R1M3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
H2afb2S4R1M3 Particl-201ENSMUST00000205370 1560 ntBASIC23.39■■□□□ 1.33
H2afb2S4R1M3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
H2afb2S4R1M3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
H2afb2S4R1M3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
H2afb2S4R1M3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
H2afb2S4R1M3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
H2afb2S4R1M3 Gm6821-201ENSMUST00000107540 542 ntBASIC23.36■■□□□ 1.33
H2afb2S4R1M3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
H2afb2S4R1M3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.35■■□□□ 1.33
H2afb2S4R1M3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
H2afb2S4R1M3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
H2afb2S4R1M3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.34■■□□□ 1.33
H2afb2S4R1M3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
H2afb2S4R1M3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.33■■□□□ 1.33
H2afb2S4R1M3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
H2afb2S4R1M3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
H2afb2S4R1M3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
H2afb2S4R1M3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
H2afb2S4R1M3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
H2afb2S4R1M3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
H2afb2S4R1M3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
H2afb2S4R1M3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
H2afb2S4R1M3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
H2afb2S4R1M3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
H2afb2S4R1M3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
H2afb2S4R1M3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
H2afb2S4R1M3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.29■■□□□ 1.32
H2afb2S4R1M3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms