Protein–RNA interactions for Protein: Q9Z0M3

Cdh20, Cadherin-20, mousemouse

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh20Q9Z0M3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Cdh20Q9Z0M3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdh20Q9Z0M3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Cdh20Q9Z0M3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdh20Q9Z0M3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.79■■□□□ 1.08
Cdh20Q9Z0M3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdh20Q9Z0M3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdh20Q9Z0M3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cdh20Q9Z0M3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Cdh20Q9Z0M3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Cdh20Q9Z0M3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cdh20Q9Z0M3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
Cdh20Q9Z0M3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cdh20Q9Z0M3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
Cdh20Q9Z0M3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cdh20Q9Z0M3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Cdh20Q9Z0M3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.75■■□□□ 1.07
Cdh20Q9Z0M3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdh20Q9Z0M3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Cdh20Q9Z0M3 Nkain2-201ENSMUST00000092602 558 ntBASIC21.75■■□□□ 1.07
Cdh20Q9Z0M3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdh20Q9Z0M3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.74■■□□□ 1.07
Cdh20Q9Z0M3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdh20Q9Z0M3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.74■■□□□ 1.07
Cdh20Q9Z0M3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdh20Q9Z0M3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdh20Q9Z0M3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
Cdh20Q9Z0M3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Cdh20Q9Z0M3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdh20Q9Z0M3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh20Q9Z0M3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Cdh20Q9Z0M3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.72■■□□□ 1.07
Cdh20Q9Z0M3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.72■■□□□ 1.07
Cdh20Q9Z0M3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Cdh20Q9Z0M3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh20Q9Z0M3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh20Q9Z0M3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh20Q9Z0M3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.71■■□□□ 1.07
Cdh20Q9Z0M3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Cdh20Q9Z0M3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh20Q9Z0M3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh20Q9Z0M3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Cdh20Q9Z0M3 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.7■■□□□ 1.06
Cdh20Q9Z0M3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdh20Q9Z0M3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.69■■□□□ 1.06
Cdh20Q9Z0M3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cdh20Q9Z0M3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdh20Q9Z0M3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Cdh20Q9Z0M3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.68■■□□□ 1.06
Cdh20Q9Z0M3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdh20Q9Z0M3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Cdh20Q9Z0M3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdh20Q9Z0M3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.66■■□□□ 1.06
Cdh20Q9Z0M3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.66■■□□□ 1.06
Cdh20Q9Z0M3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Cdh20Q9Z0M3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cdh20Q9Z0M3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cdh20Q9Z0M3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cdh20Q9Z0M3 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.64■■□□□ 1.05
Cdh20Q9Z0M3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cdh20Q9Z0M3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cdh20Q9Z0M3 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.62■■□□□ 1.05
Cdh20Q9Z0M3 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.62■■□□□ 1.05
Cdh20Q9Z0M3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.61■■□□□ 1.05
Cdh20Q9Z0M3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Cdh20Q9Z0M3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.61■■□□□ 1.05
Cdh20Q9Z0M3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdh20Q9Z0M3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cdh20Q9Z0M3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cdh20Q9Z0M3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cdh20Q9Z0M3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.6■■□□□ 1.05
Cdh20Q9Z0M3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
Cdh20Q9Z0M3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdh20Q9Z0M3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Cdh20Q9Z0M3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.59■■□□□ 1.05
Cdh20Q9Z0M3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cdh20Q9Z0M3 Particl-201ENSMUST00000205370 1560 ntBASIC21.58■■□□□ 1.05
Cdh20Q9Z0M3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cdh20Q9Z0M3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cdh20Q9Z0M3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Cdh20Q9Z0M3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cdh20Q9Z0M3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cdh20Q9Z0M3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdh20Q9Z0M3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cdh20Q9Z0M3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdh20Q9Z0M3 Gm6821-201ENSMUST00000107540 542 ntBASIC21.53■■□□□ 1.04
Cdh20Q9Z0M3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.53■■□□□ 1.04
Cdh20Q9Z0M3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cdh20Q9Z0M3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.52■■□□□ 1.04
Cdh20Q9Z0M3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cdh20Q9Z0M3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cdh20Q9Z0M3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.51■■□□□ 1.03
Cdh20Q9Z0M3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.51■■□□□ 1.03
Cdh20Q9Z0M3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cdh20Q9Z0M3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cdh20Q9Z0M3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Cdh20Q9Z0M3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cdh20Q9Z0M3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cdh20Q9Z0M3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Cdh20Q9Z0M3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms