Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Gm30023-201ENSMUST00000197970 889 ntBASIC21.63■■□□□ 1.05
ClcnkaQ9WUB7 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.63■■□□□ 1.05
ClcnkaQ9WUB7 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
ClcnkaQ9WUB7 Nkain2-201ENSMUST00000092602 558 ntBASIC21.62■■□□□ 1.05
ClcnkaQ9WUB7 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ClcnkaQ9WUB7 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
ClcnkaQ9WUB7 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ClcnkaQ9WUB7 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ClcnkaQ9WUB7 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.61■■□□□ 1.05
ClcnkaQ9WUB7 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.6■■□□□ 1.05
ClcnkaQ9WUB7 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ClcnkaQ9WUB7 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ClcnkaQ9WUB7 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
ClcnkaQ9WUB7 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ClcnkaQ9WUB7 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ClcnkaQ9WUB7 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.59■■□□□ 1.05
ClcnkaQ9WUB7 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
ClcnkaQ9WUB7 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
ClcnkaQ9WUB7 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
ClcnkaQ9WUB7 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ClcnkaQ9WUB7 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
ClcnkaQ9WUB7 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ClcnkaQ9WUB7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
ClcnkaQ9WUB7 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.56■■□□□ 1.04
ClcnkaQ9WUB7 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ClcnkaQ9WUB7 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ClcnkaQ9WUB7 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.56■■□□□ 1.04
ClcnkaQ9WUB7 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
ClcnkaQ9WUB7 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ClcnkaQ9WUB7 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ClcnkaQ9WUB7 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
ClcnkaQ9WUB7 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.55■■□□□ 1.04
ClcnkaQ9WUB7 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
ClcnkaQ9WUB7 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ClcnkaQ9WUB7 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ClcnkaQ9WUB7 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ClcnkaQ9WUB7 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ClcnkaQ9WUB7 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
ClcnkaQ9WUB7 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ClcnkaQ9WUB7 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ClcnkaQ9WUB7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
ClcnkaQ9WUB7 Gm6821-201ENSMUST00000107540 542 ntBASIC21.52■■□□□ 1.04
ClcnkaQ9WUB7 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
ClcnkaQ9WUB7 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
ClcnkaQ9WUB7 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ClcnkaQ9WUB7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
ClcnkaQ9WUB7 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ClcnkaQ9WUB7 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ClcnkaQ9WUB7 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
ClcnkaQ9WUB7 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
ClcnkaQ9WUB7 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ClcnkaQ9WUB7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ClcnkaQ9WUB7 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ClcnkaQ9WUB7 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ClcnkaQ9WUB7 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ClcnkaQ9WUB7 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ClcnkaQ9WUB7 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ClcnkaQ9WUB7 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ClcnkaQ9WUB7 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
ClcnkaQ9WUB7 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ClcnkaQ9WUB7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.45■■□□□ 1.02
ClcnkaQ9WUB7 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.45■■□□□ 1.02
ClcnkaQ9WUB7 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.44■■□□□ 1.02
ClcnkaQ9WUB7 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.44■■□□□ 1.02
ClcnkaQ9WUB7 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
ClcnkaQ9WUB7 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ClcnkaQ9WUB7 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.42■■□□□ 1.02
ClcnkaQ9WUB7 Gm8503-201ENSMUST00000118131 455 ntBASIC21.42■■□□□ 1.02
ClcnkaQ9WUB7 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.42■■□□□ 1.02
ClcnkaQ9WUB7 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ClcnkaQ9WUB7 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ClcnkaQ9WUB7 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ClcnkaQ9WUB7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ClcnkaQ9WUB7 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
ClcnkaQ9WUB7 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.4■■□□□ 1.02
ClcnkaQ9WUB7 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.4■■□□□ 1.02
ClcnkaQ9WUB7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.4■■□□□ 1.02
ClcnkaQ9WUB7 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ClcnkaQ9WUB7 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
ClcnkaQ9WUB7 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ClcnkaQ9WUB7 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ClcnkaQ9WUB7 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ClcnkaQ9WUB7 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.39■■□□□ 1.01
ClcnkaQ9WUB7 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
ClcnkaQ9WUB7 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ClcnkaQ9WUB7 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
ClcnkaQ9WUB7 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ClcnkaQ9WUB7 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
ClcnkaQ9WUB7 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
ClcnkaQ9WUB7 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.36■■□□□ 1.01
ClcnkaQ9WUB7 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ClcnkaQ9WUB7 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
ClcnkaQ9WUB7 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
ClcnkaQ9WUB7 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.35■■□□□ 1.01
ClcnkaQ9WUB7 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ClcnkaQ9WUB7 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ClcnkaQ9WUB7 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ClcnkaQ9WUB7 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ClcnkaQ9WUB7 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ClcnkaQ9WUB7 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms