Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smco4Q9JIS3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smco4Q9JIS3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smco4Q9JIS3 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.98■□□□□ 0.63
Smco4Q9JIS3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smco4Q9JIS3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.98■□□□□ 0.63
Smco4Q9JIS3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smco4Q9JIS3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smco4Q9JIS3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smco4Q9JIS3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Smco4Q9JIS3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Smco4Q9JIS3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smco4Q9JIS3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Smco4Q9JIS3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Smco4Q9JIS3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smco4Q9JIS3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smco4Q9JIS3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smco4Q9JIS3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smco4Q9JIS3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smco4Q9JIS3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.93■□□□□ 0.62
Smco4Q9JIS3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC18.93■□□□□ 0.62
Smco4Q9JIS3 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Smco4Q9JIS3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smco4Q9JIS3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Smco4Q9JIS3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smco4Q9JIS3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Smco4Q9JIS3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Smco4Q9JIS3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smco4Q9JIS3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smco4Q9JIS3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smco4Q9JIS3 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smco4Q9JIS3 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smco4Q9JIS3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smco4Q9JIS3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Smco4Q9JIS3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smco4Q9JIS3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.9■□□□□ 0.62
Smco4Q9JIS3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smco4Q9JIS3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
Smco4Q9JIS3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smco4Q9JIS3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Smco4Q9JIS3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Smco4Q9JIS3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Smco4Q9JIS3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smco4Q9JIS3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.89■□□□□ 0.61
Smco4Q9JIS3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Smco4Q9JIS3 Mipep-204ENSMUST00000225043 1548 ntBASIC18.88■□□□□ 0.61
Smco4Q9JIS3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smco4Q9JIS3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smco4Q9JIS3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smco4Q9JIS3 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smco4Q9JIS3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smco4Q9JIS3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smco4Q9JIS3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smco4Q9JIS3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smco4Q9JIS3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smco4Q9JIS3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smco4Q9JIS3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smco4Q9JIS3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Smco4Q9JIS3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.86■□□□□ 0.61
Smco4Q9JIS3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smco4Q9JIS3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smco4Q9JIS3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Smco4Q9JIS3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Smco4Q9JIS3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smco4Q9JIS3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smco4Q9JIS3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smco4Q9JIS3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Smco4Q9JIS3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smco4Q9JIS3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Smco4Q9JIS3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smco4Q9JIS3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smco4Q9JIS3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smco4Q9JIS3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smco4Q9JIS3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Smco4Q9JIS3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smco4Q9JIS3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Smco4Q9JIS3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Smco4Q9JIS3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smco4Q9JIS3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smco4Q9JIS3 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Smco4Q9JIS3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Smco4Q9JIS3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Smco4Q9JIS3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smco4Q9JIS3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Smco4Q9JIS3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.81■□□□□ 0.6
Smco4Q9JIS3 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.81■□□□□ 0.6
Smco4Q9JIS3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smco4Q9JIS3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.8■□□□□ 0.6
Smco4Q9JIS3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smco4Q9JIS3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smco4Q9JIS3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smco4Q9JIS3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Smco4Q9JIS3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smco4Q9JIS3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Smco4Q9JIS3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smco4Q9JIS3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smco4Q9JIS3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC18.79■□□□□ 0.6
Smco4Q9JIS3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Smco4Q9JIS3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smco4Q9JIS3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms