Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.48■□□□□ 0.87
Mbd3l1Q9D9H3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Mbd3l1Q9D9H3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mbd3l1Q9D9H3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Mbd3l1Q9D9H3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Mbd3l1Q9D9H3 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mbd3l1Q9D9H3 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.46■□□□□ 0.87
Mbd3l1Q9D9H3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Mbd3l1Q9D9H3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Mbd3l1Q9D9H3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Mbd3l1Q9D9H3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Mbd3l1Q9D9H3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Mbd3l1Q9D9H3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Mbd3l1Q9D9H3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Mbd3l1Q9D9H3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mbd3l1Q9D9H3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Mbd3l1Q9D9H3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mbd3l1Q9D9H3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mbd3l1Q9D9H3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mbd3l1Q9D9H3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Mbd3l1Q9D9H3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mbd3l1Q9D9H3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mbd3l1Q9D9H3 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Mbd3l1Q9D9H3 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.41■□□□□ 0.86
Mbd3l1Q9D9H3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mbd3l1Q9D9H3 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mbd3l1Q9D9H3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mbd3l1Q9D9H3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mbd3l1Q9D9H3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mbd3l1Q9D9H3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mbd3l1Q9D9H3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Mbd3l1Q9D9H3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Mbd3l1Q9D9H3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Mbd3l1Q9D9H3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Mbd3l1Q9D9H3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Mbd3l1Q9D9H3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Mbd3l1Q9D9H3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Mbd3l1Q9D9H3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Mbd3l1Q9D9H3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mbd3l1Q9D9H3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Mbd3l1Q9D9H3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
Mbd3l1Q9D9H3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mbd3l1Q9D9H3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
Mbd3l1Q9D9H3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mbd3l1Q9D9H3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mbd3l1Q9D9H3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Mbd3l1Q9D9H3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mbd3l1Q9D9H3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
Mbd3l1Q9D9H3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mbd3l1Q9D9H3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mbd3l1Q9D9H3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Mbd3l1Q9D9H3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.35■□□□□ 0.85
Mbd3l1Q9D9H3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Mbd3l1Q9D9H3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.34■□□□□ 0.85
Mbd3l1Q9D9H3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Mbd3l1Q9D9H3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mbd3l1Q9D9H3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mbd3l1Q9D9H3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mbd3l1Q9D9H3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mbd3l1Q9D9H3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Mbd3l1Q9D9H3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Mbd3l1Q9D9H3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Mbd3l1Q9D9H3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Mbd3l1Q9D9H3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Mbd3l1Q9D9H3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Mbd3l1Q9D9H3 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.33■□□□□ 0.84
Mbd3l1Q9D9H3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Mbd3l1Q9D9H3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Mbd3l1Q9D9H3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Mbd3l1Q9D9H3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mbd3l1Q9D9H3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Mbd3l1Q9D9H3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mbd3l1Q9D9H3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mbd3l1Q9D9H3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Mbd3l1Q9D9H3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Mbd3l1Q9D9H3 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mbd3l1Q9D9H3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mbd3l1Q9D9H3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mbd3l1Q9D9H3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mbd3l1Q9D9H3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
Mbd3l1Q9D9H3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mbd3l1Q9D9H3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mbd3l1Q9D9H3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.29■□□□□ 0.84
Mbd3l1Q9D9H3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mbd3l1Q9D9H3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mbd3l1Q9D9H3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mbd3l1Q9D9H3 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.28■□□□□ 0.84
Mbd3l1Q9D9H3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mbd3l1Q9D9H3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Mbd3l1Q9D9H3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Mbd3l1Q9D9H3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Mbd3l1Q9D9H3 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Mbd3l1Q9D9H3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mbd3l1Q9D9H3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Mbd3l1Q9D9H3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.26■□□□□ 0.83
Mbd3l1Q9D9H3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mbd3l1Q9D9H3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mbd3l1Q9D9H3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Mbd3l1Q9D9H3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Mbd3l1Q9D9H3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms