Protein–RNA interactions for Protein: Q9D842

Aplf, Aprataxin and PNK-like factor, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AplfQ9D842 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AplfQ9D842 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AplfQ9D842 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AplfQ9D842 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AplfQ9D842 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.95■□□□□ 0.94
AplfQ9D842 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AplfQ9D842 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
AplfQ9D842 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
AplfQ9D842 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.94■□□□□ 0.94
AplfQ9D842 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
AplfQ9D842 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
AplfQ9D842 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.92■□□□□ 0.94
AplfQ9D842 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
AplfQ9D842 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AplfQ9D842 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
AplfQ9D842 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.91■□□□□ 0.94
AplfQ9D842 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
AplfQ9D842 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AplfQ9D842 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
AplfQ9D842 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AplfQ9D842 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
AplfQ9D842 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
AplfQ9D842 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
AplfQ9D842 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AplfQ9D842 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
AplfQ9D842 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
AplfQ9D842 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
AplfQ9D842 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
AplfQ9D842 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
AplfQ9D842 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.86■□□□□ 0.93
AplfQ9D842 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
AplfQ9D842 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AplfQ9D842 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
AplfQ9D842 Gm7432-201ENSMUST00000210343 879 ntBASIC20.86■□□□□ 0.93
AplfQ9D842 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
AplfQ9D842 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
AplfQ9D842 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
AplfQ9D842 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.85■□□□□ 0.93
AplfQ9D842 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
AplfQ9D842 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
AplfQ9D842 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
AplfQ9D842 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
AplfQ9D842 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.83■□□□□ 0.93
AplfQ9D842 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
AplfQ9D842 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
AplfQ9D842 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.82■□□□□ 0.92
AplfQ9D842 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
AplfQ9D842 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
AplfQ9D842 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
AplfQ9D842 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
AplfQ9D842 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
AplfQ9D842 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.81■□□□□ 0.92
AplfQ9D842 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
AplfQ9D842 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
AplfQ9D842 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
AplfQ9D842 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.8■□□□□ 0.92
AplfQ9D842 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
AplfQ9D842 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
AplfQ9D842 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
AplfQ9D842 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
AplfQ9D842 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
AplfQ9D842 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.79■□□□□ 0.92
AplfQ9D842 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AplfQ9D842 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AplfQ9D842 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AplfQ9D842 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
AplfQ9D842 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
AplfQ9D842 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
AplfQ9D842 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
AplfQ9D842 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
AplfQ9D842 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
AplfQ9D842 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.76■□□□□ 0.91
AplfQ9D842 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.76■□□□□ 0.91
AplfQ9D842 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.75■□□□□ 0.91
AplfQ9D842 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.75■□□□□ 0.91
AplfQ9D842 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
AplfQ9D842 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
AplfQ9D842 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AplfQ9D842 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.73■□□□□ 0.91
AplfQ9D842 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
AplfQ9D842 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
AplfQ9D842 Gm11599-201ENSMUST00000118720 878 ntBASIC20.73■□□□□ 0.91
AplfQ9D842 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AplfQ9D842 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AplfQ9D842 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.72■□□□□ 0.91
AplfQ9D842 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
AplfQ9D842 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AplfQ9D842 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AplfQ9D842 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AplfQ9D842 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AplfQ9D842 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
AplfQ9D842 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
AplfQ9D842 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.7■□□□□ 0.9
AplfQ9D842 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
AplfQ9D842 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AplfQ9D842 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AplfQ9D842 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AplfQ9D842 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
AplfQ9D842 Gm30023-201ENSMUST00000197970 889 ntBASIC20.69■□□□□ 0.9
AplfQ9D842 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms