Protein–RNA interactions for Protein: Q9D0P8

Ift27, Intraflagellar transport protein 27 homolog, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift27Q9D0P8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ift27Q9D0P8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ift27Q9D0P8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ift27Q9D0P8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Ift27Q9D0P8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ift27Q9D0P8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ift27Q9D0P8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ift27Q9D0P8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ift27Q9D0P8 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Ift27Q9D0P8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ift27Q9D0P8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ift27Q9D0P8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.37■■□□□ 1.01
Ift27Q9D0P8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ift27Q9D0P8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ift27Q9D0P8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ift27Q9D0P8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
Ift27Q9D0P8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ift27Q9D0P8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Ift27Q9D0P8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ift27Q9D0P8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ift27Q9D0P8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Ift27Q9D0P8 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Ift27Q9D0P8 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ift27Q9D0P8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.34■■□□□ 1.01
Ift27Q9D0P8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ift27Q9D0P8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Ift27Q9D0P8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ift27Q9D0P8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.33■■□□□ 1
Ift27Q9D0P8 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.32■■□□□ 1
Ift27Q9D0P8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Ift27Q9D0P8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ift27Q9D0P8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.32■■□□□ 1
Ift27Q9D0P8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ift27Q9D0P8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ift27Q9D0P8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
Ift27Q9D0P8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
Ift27Q9D0P8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ift27Q9D0P8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.31■■□□□ 1
Ift27Q9D0P8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ift27Q9D0P8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ift27Q9D0P8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ift27Q9D0P8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ift27Q9D0P8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ift27Q9D0P8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ift27Q9D0P8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Ift27Q9D0P8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ift27Q9D0P8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Ift27Q9D0P8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ift27Q9D0P8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ift27Q9D0P8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Ift27Q9D0P8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ift27Q9D0P8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ift27Q9D0P8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
Ift27Q9D0P8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Ift27Q9D0P8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.25■□□□□ 0.99
Ift27Q9D0P8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ift27Q9D0P8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ift27Q9D0P8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ift27Q9D0P8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ift27Q9D0P8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
Ift27Q9D0P8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ift27Q9D0P8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ift27Q9D0P8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ift27Q9D0P8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ift27Q9D0P8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ift27Q9D0P8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.23■□□□□ 0.99
Ift27Q9D0P8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ift27Q9D0P8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ift27Q9D0P8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Ift27Q9D0P8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ift27Q9D0P8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ift27Q9D0P8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ift27Q9D0P8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ift27Q9D0P8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ift27Q9D0P8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ift27Q9D0P8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.22■□□□□ 0.99
Ift27Q9D0P8 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ift27Q9D0P8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ift27Q9D0P8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.22■□□□□ 0.99
Ift27Q9D0P8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Ift27Q9D0P8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ift27Q9D0P8 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Ift27Q9D0P8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ift27Q9D0P8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ift27Q9D0P8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Ift27Q9D0P8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ift27Q9D0P8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ift27Q9D0P8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ift27Q9D0P8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ift27Q9D0P8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ift27Q9D0P8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ift27Q9D0P8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ift27Q9D0P8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ift27Q9D0P8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ift27Q9D0P8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Ift27Q9D0P8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ift27Q9D0P8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ift27Q9D0P8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ift27Q9D0P8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ift27Q9D0P8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 185.5 ms