Protein–RNA interactions for Protein: Q9CY16

Mrps28, 28S ribosomal protein S28, mitochondrial, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrps28Q9CY16 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Mrps28Q9CY16 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mrps28Q9CY16 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mrps28Q9CY16 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Mrps28Q9CY16 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.21■□□□□ 0.99
Mrps28Q9CY16 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mrps28Q9CY16 Gm8503-201ENSMUST00000118131 455 ntBASIC21.2■□□□□ 0.98
Mrps28Q9CY16 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.19■□□□□ 0.98
Mrps28Q9CY16 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.19■□□□□ 0.98
Mrps28Q9CY16 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mrps28Q9CY16 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Mrps28Q9CY16 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mrps28Q9CY16 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mrps28Q9CY16 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mrps28Q9CY16 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mrps28Q9CY16 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.18■□□□□ 0.98
Mrps28Q9CY16 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Mrps28Q9CY16 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mrps28Q9CY16 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Mrps28Q9CY16 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Mrps28Q9CY16 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.16■□□□□ 0.98
Mrps28Q9CY16 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mrps28Q9CY16 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Mrps28Q9CY16 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Mrps28Q9CY16 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Mrps28Q9CY16 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.14■□□□□ 0.98
Mrps28Q9CY16 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.13■□□□□ 0.97
Mrps28Q9CY16 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Mrps28Q9CY16 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Mrps28Q9CY16 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Mrps28Q9CY16 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Mrps28Q9CY16 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Mrps28Q9CY16 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Mrps28Q9CY16 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Mrps28Q9CY16 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.12■□□□□ 0.97
Mrps28Q9CY16 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.11■□□□□ 0.97
Mrps28Q9CY16 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mrps28Q9CY16 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Mrps28Q9CY16 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Mrps28Q9CY16 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Mrps28Q9CY16 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Mrps28Q9CY16 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Mrps28Q9CY16 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Mrps28Q9CY16 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Mrps28Q9CY16 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.08■□□□□ 0.97
Mrps28Q9CY16 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.08■□□□□ 0.97
Mrps28Q9CY16 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Mrps28Q9CY16 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Mrps28Q9CY16 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mrps28Q9CY16 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mrps28Q9CY16 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Mrps28Q9CY16 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mrps28Q9CY16 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mrps28Q9CY16 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.06■□□□□ 0.96
Mrps28Q9CY16 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Mrps28Q9CY16 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mrps28Q9CY16 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.06■□□□□ 0.96
Mrps28Q9CY16 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mrps28Q9CY16 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mrps28Q9CY16 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mrps28Q9CY16 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Mrps28Q9CY16 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mrps28Q9CY16 Particl-201ENSMUST00000205370 1560 ntBASIC21.03■□□□□ 0.96
Mrps28Q9CY16 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Mrps28Q9CY16 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.02■□□□□ 0.96
Mrps28Q9CY16 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.02■□□□□ 0.96
Mrps28Q9CY16 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Mrps28Q9CY16 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mrps28Q9CY16 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Mrps28Q9CY16 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mrps28Q9CY16 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mrps28Q9CY16 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21■□□□□ 0.95
Mrps28Q9CY16 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Mrps28Q9CY16 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mrps28Q9CY16 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mrps28Q9CY16 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mrps28Q9CY16 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Mrps28Q9CY16 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Mrps28Q9CY16 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mrps28Q9CY16 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Mrps28Q9CY16 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Mrps28Q9CY16 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mrps28Q9CY16 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mrps28Q9CY16 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Mrps28Q9CY16 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Mrps28Q9CY16 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mrps28Q9CY16 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mrps28Q9CY16 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Mrps28Q9CY16 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mrps28Q9CY16 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mrps28Q9CY16 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Mrps28Q9CY16 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Mrps28Q9CY16 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mrps28Q9CY16 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mrps28Q9CY16 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mrps28Q9CY16 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Mrps28Q9CY16 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Mrps28Q9CY16 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.93■□□□□ 0.94
Mrps28Q9CY16 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.92■□□□□ 0.94
Mrps28Q9CY16 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms