Protein–RNA interactions for Protein: Q9CR78

Msantd3, Myb/SANT-like DNA-binding domain-containing protein 3, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msantd3Q9CR78 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Msantd3Q9CR78 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Msantd3Q9CR78 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Msantd3Q9CR78 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Msantd3Q9CR78 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.66■■□□□ 1.22
Msantd3Q9CR78 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Msantd3Q9CR78 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Msantd3Q9CR78 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.66■■□□□ 1.22
Msantd3Q9CR78 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
Msantd3Q9CR78 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Msantd3Q9CR78 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Msantd3Q9CR78 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Msantd3Q9CR78 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Msantd3Q9CR78 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.63■■□□□ 1.21
Msantd3Q9CR78 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Msantd3Q9CR78 Gm11687-201ENSMUST00000118911 886 ntBASIC22.61■■□□□ 1.21
Msantd3Q9CR78 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Msantd3Q9CR78 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Msantd3Q9CR78 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Msantd3Q9CR78 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Msantd3Q9CR78 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.6■■□□□ 1.21
Msantd3Q9CR78 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC22.6■■□□□ 1.21
Msantd3Q9CR78 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Msantd3Q9CR78 Gm9806-201ENSMUST00000051080 552 ntBASIC22.6■■□□□ 1.21
Msantd3Q9CR78 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Msantd3Q9CR78 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.59■■□□□ 1.21
Msantd3Q9CR78 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Msantd3Q9CR78 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.58■■□□□ 1.21
Msantd3Q9CR78 Scarna2-201ENSMUST00000157560 414 ntBASIC22.58■■□□□ 1.21
Msantd3Q9CR78 Gm4799-201ENSMUST00000095396 657 ntBASIC22.58■■□□□ 1.21
Msantd3Q9CR78 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Msantd3Q9CR78 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Msantd3Q9CR78 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Msantd3Q9CR78 Mir3960-201ENSMUST00000198213 73 ntBASIC22.56■■□□□ 1.2
Msantd3Q9CR78 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Msantd3Q9CR78 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Msantd3Q9CR78 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.54■■□□□ 1.2
Msantd3Q9CR78 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Msantd3Q9CR78 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Msantd3Q9CR78 Gm37136-201ENSMUST00000194368 194 ntBASIC22.52■■□□□ 1.2
Msantd3Q9CR78 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.52■■□□□ 1.2
Msantd3Q9CR78 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Msantd3Q9CR78 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Msantd3Q9CR78 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Msantd3Q9CR78 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Msantd3Q9CR78 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Msantd3Q9CR78 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Msantd3Q9CR78 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Msantd3Q9CR78 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Msantd3Q9CR78 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Msantd3Q9CR78 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Msantd3Q9CR78 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Msantd3Q9CR78 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Msantd3Q9CR78 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.47■■□□□ 1.19
Msantd3Q9CR78 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Msantd3Q9CR78 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Msantd3Q9CR78 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.47■■□□□ 1.19
Msantd3Q9CR78 Gm12366-201ENSMUST00000121722 873 ntBASIC22.47■■□□□ 1.19
Msantd3Q9CR78 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.47■■□□□ 1.19
Msantd3Q9CR78 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.47■■□□□ 1.19
Msantd3Q9CR78 Gm5786-201ENSMUST00000085368 882 ntBASIC22.47■■□□□ 1.19
Msantd3Q9CR78 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.47■■□□□ 1.19
Msantd3Q9CR78 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Msantd3Q9CR78 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Msantd3Q9CR78 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.46■■□□□ 1.19
Msantd3Q9CR78 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Msantd3Q9CR78 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.19
Msantd3Q9CR78 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Msantd3Q9CR78 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.45■■□□□ 1.18
Msantd3Q9CR78 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.45■■□□□ 1.18
Msantd3Q9CR78 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Msantd3Q9CR78 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Msantd3Q9CR78 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.44■■□□□ 1.18
Msantd3Q9CR78 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.44■■□□□ 1.18
Msantd3Q9CR78 Gm45364-201ENSMUST00000210883 159 ntBASIC22.44■■□□□ 1.18
Msantd3Q9CR78 Gm16437-201ENSMUST00000025669 507 ntBASIC22.44■■□□□ 1.18
Msantd3Q9CR78 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Msantd3Q9CR78 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Msantd3Q9CR78 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Msantd3Q9CR78 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Msantd3Q9CR78 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Msantd3Q9CR78 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Msantd3Q9CR78 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Msantd3Q9CR78 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Msantd3Q9CR78 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Msantd3Q9CR78 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Msantd3Q9CR78 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Msantd3Q9CR78 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Msantd3Q9CR78 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Msantd3Q9CR78 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Msantd3Q9CR78 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.4■■□□□ 1.18
Msantd3Q9CR78 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Msantd3Q9CR78 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Msantd3Q9CR78 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Msantd3Q9CR78 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.39■■□□□ 1.18
Msantd3Q9CR78 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Msantd3Q9CR78 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Msantd3Q9CR78 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Msantd3Q9CR78 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Msantd3Q9CR78 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms