Protein–RNA interactions for Protein: Q9CPW3

Mrpl54, 39S ribosomal protein L54, mitochondrial, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl54Q9CPW3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mrpl54Q9CPW3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Mrpl54Q9CPW3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Mrpl54Q9CPW3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mrpl54Q9CPW3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Mrpl54Q9CPW3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mrpl54Q9CPW3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Mrpl54Q9CPW3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Mrpl54Q9CPW3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mrpl54Q9CPW3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Mrpl54Q9CPW3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mrpl54Q9CPW3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mrpl54Q9CPW3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mrpl54Q9CPW3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21■□□□□ 0.95
Mrpl54Q9CPW3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Mrpl54Q9CPW3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Mrpl54Q9CPW3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Mrpl54Q9CPW3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21■□□□□ 0.95
Mrpl54Q9CPW3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mrpl54Q9CPW3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.99■□□□□ 0.95
Mrpl54Q9CPW3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mrpl54Q9CPW3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Mrpl54Q9CPW3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mrpl54Q9CPW3 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Mrpl54Q9CPW3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mrpl54Q9CPW3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mrpl54Q9CPW3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mrpl54Q9CPW3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Mrpl54Q9CPW3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mrpl54Q9CPW3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Mrpl54Q9CPW3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mrpl54Q9CPW3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
Mrpl54Q9CPW3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Mrpl54Q9CPW3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.97■□□□□ 0.95
Mrpl54Q9CPW3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mrpl54Q9CPW3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Mrpl54Q9CPW3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.97■□□□□ 0.95
Mrpl54Q9CPW3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Mrpl54Q9CPW3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Mrpl54Q9CPW3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mrpl54Q9CPW3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mrpl54Q9CPW3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Mrpl54Q9CPW3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Mrpl54Q9CPW3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mrpl54Q9CPW3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mrpl54Q9CPW3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mrpl54Q9CPW3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.95■□□□□ 0.94
Mrpl54Q9CPW3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Mrpl54Q9CPW3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Mrpl54Q9CPW3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mrpl54Q9CPW3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.93■□□□□ 0.94
Mrpl54Q9CPW3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Mrpl54Q9CPW3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mrpl54Q9CPW3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mrpl54Q9CPW3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.92■□□□□ 0.94
Mrpl54Q9CPW3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Mrpl54Q9CPW3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mrpl54Q9CPW3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Mrpl54Q9CPW3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Mrpl54Q9CPW3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mrpl54Q9CPW3 Gm25262-201ENSMUST00000174934 133 ntBASIC20.9■□□□□ 0.94
Mrpl54Q9CPW3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mrpl54Q9CPW3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Mrpl54Q9CPW3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.89■□□□□ 0.94
Mrpl54Q9CPW3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Mrpl54Q9CPW3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Mrpl54Q9CPW3 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.88■□□□□ 0.93
Mrpl54Q9CPW3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Mrpl54Q9CPW3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Mrpl54Q9CPW3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Mrpl54Q9CPW3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Mrpl54Q9CPW3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Mrpl54Q9CPW3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Mrpl54Q9CPW3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Mrpl54Q9CPW3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mrpl54Q9CPW3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mrpl54Q9CPW3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mrpl54Q9CPW3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mrpl54Q9CPW3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mrpl54Q9CPW3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mrpl54Q9CPW3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Mrpl54Q9CPW3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Mrpl54Q9CPW3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
Mrpl54Q9CPW3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Mrpl54Q9CPW3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Mrpl54Q9CPW3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Mrpl54Q9CPW3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Mrpl54Q9CPW3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Mrpl54Q9CPW3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mrpl54Q9CPW3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mrpl54Q9CPW3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mrpl54Q9CPW3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Mrpl54Q9CPW3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Mrpl54Q9CPW3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.82■□□□□ 0.92
Mrpl54Q9CPW3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mrpl54Q9CPW3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.81■□□□□ 0.92
Mrpl54Q9CPW3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Mrpl54Q9CPW3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mrpl54Q9CPW3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mrpl54Q9CPW3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms