Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Pcdhb5Q91XZ5 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Pcdhb5Q91XZ5 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Pcdhb5Q91XZ5 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Pcdhb5Q91XZ5 Gm4799-201ENSMUST00000095396 657 ntBASIC28.25■■■□□ 2.11
Pcdhb5Q91XZ5 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Pcdhb5Q91XZ5 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC28.25■■■□□ 2.11
Pcdhb5Q91XZ5 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Pcdhb5Q91XZ5 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
Pcdhb5Q91XZ5 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Pcdhb5Q91XZ5 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC28.22■■■□□ 2.11
Pcdhb5Q91XZ5 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC28.22■■■□□ 2.11
Pcdhb5Q91XZ5 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Pcdhb5Q91XZ5 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Pcdhb5Q91XZ5 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Pcdhb5Q91XZ5 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
Pcdhb5Q91XZ5 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Pcdhb5Q91XZ5 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC28.2■■■□□ 2.1
Pcdhb5Q91XZ5 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC28.2■■■□□ 2.1
Pcdhb5Q91XZ5 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC28.19■■■□□ 2.1
Pcdhb5Q91XZ5 Scarna2-201ENSMUST00000157560 414 ntBASIC28.19■■■□□ 2.1
Pcdhb5Q91XZ5 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Pcdhb5Q91XZ5 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC28.19■■■□□ 2.1
Pcdhb5Q91XZ5 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Pcdhb5Q91XZ5 Gm37136-201ENSMUST00000194368 194 ntBASIC28.18■■■□□ 2.1
Pcdhb5Q91XZ5 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC28.18■■■□□ 2.1
Pcdhb5Q91XZ5 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Pcdhb5Q91XZ5 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
Pcdhb5Q91XZ5 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Pcdhb5Q91XZ5 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Pcdhb5Q91XZ5 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Pcdhb5Q91XZ5 Gm43445-201ENSMUST00000198564 2091 ntBASIC28.17■■■□□ 2.1
Pcdhb5Q91XZ5 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Pcdhb5Q91XZ5 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Pcdhb5Q91XZ5 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Pcdhb5Q91XZ5 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Pcdhb5Q91XZ5 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC28.15■■■□□ 2.1
Pcdhb5Q91XZ5 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Pcdhb5Q91XZ5 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Pcdhb5Q91XZ5 Mir3960-201ENSMUST00000198213 73 ntBASIC28.14■■■□□ 2.1
Pcdhb5Q91XZ5 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
Pcdhb5Q91XZ5 AC154454.1-201ENSMUST00000225253 216 ntBASIC28.14■■■□□ 2.1
Pcdhb5Q91XZ5 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.09
Pcdhb5Q91XZ5 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
Pcdhb5Q91XZ5 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Pcdhb5Q91XZ5 Pkd1-207ENSMUST00000228550 1050 ntBASIC28.13■■■□□ 2.09
Pcdhb5Q91XZ5 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC28.12■■■□□ 2.09
Pcdhb5Q91XZ5 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
Pcdhb5Q91XZ5 Gm9806-201ENSMUST00000051080 552 ntBASIC28.11■■■□□ 2.09
Pcdhb5Q91XZ5 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Pcdhb5Q91XZ5 Gm11687-201ENSMUST00000118911 886 ntBASIC28.09■■■□□ 2.09
Pcdhb5Q91XZ5 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Pcdhb5Q91XZ5 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC28.09■■■□□ 2.09
Pcdhb5Q91XZ5 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Pcdhb5Q91XZ5 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Pcdhb5Q91XZ5 Gm16437-201ENSMUST00000025669 507 ntBASIC28.07■■■□□ 2.08
Pcdhb5Q91XZ5 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC28.07■■■□□ 2.08
Pcdhb5Q91XZ5 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Pcdhb5Q91XZ5 Gm45364-201ENSMUST00000210883 159 ntBASIC28.06■■■□□ 2.08
Pcdhb5Q91XZ5 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC28.05■■■□□ 2.08
Pcdhb5Q91XZ5 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC28.05■■■□□ 2.08
Pcdhb5Q91XZ5 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
Pcdhb5Q91XZ5 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Pcdhb5Q91XZ5 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Pcdhb5Q91XZ5 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC28.03■■■□□ 2.08
Pcdhb5Q91XZ5 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Pcdhb5Q91XZ5 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Pcdhb5Q91XZ5 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Pcdhb5Q91XZ5 Gm13889-201ENSMUST00000099689 1386 ntBASIC28■■■□□ 2.07
Pcdhb5Q91XZ5 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC28■■■□□ 2.07
Pcdhb5Q91XZ5 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC28■■■□□ 2.07
Pcdhb5Q91XZ5 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC27.99■■■□□ 2.07
Pcdhb5Q91XZ5 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Pcdhb5Q91XZ5 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Pcdhb5Q91XZ5 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Pcdhb5Q91XZ5 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Pcdhb5Q91XZ5 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Pcdhb5Q91XZ5 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Pcdhb5Q91XZ5 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Pcdhb5Q91XZ5 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC27.95■■■□□ 2.06
Pcdhb5Q91XZ5 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC27.95■■■□□ 2.06
Pcdhb5Q91XZ5 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC27.95■■■□□ 2.06
Pcdhb5Q91XZ5 Gm12818-201ENSMUST00000117562 1349 ntBASIC27.94■■■□□ 2.06
Pcdhb5Q91XZ5 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Pcdhb5Q91XZ5 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Pcdhb5Q91XZ5 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Pcdhb5Q91XZ5 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Pcdhb5Q91XZ5 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC27.92■■■□□ 2.06
Pcdhb5Q91XZ5 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Pcdhb5Q91XZ5 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Pcdhb5Q91XZ5 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC27.92■■■□□ 2.06
Pcdhb5Q91XZ5 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC27.91■■■□□ 2.06
Pcdhb5Q91XZ5 Gm12366-201ENSMUST00000121722 873 ntBASIC27.91■■■□□ 2.06
Pcdhb5Q91XZ5 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC27.91■■■□□ 2.06
Pcdhb5Q91XZ5 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC27.91■■■□□ 2.06
Pcdhb5Q91XZ5 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC27.91■■■□□ 2.06
Pcdhb5Q91XZ5 Gm5786-201ENSMUST00000085368 882 ntBASIC27.91■■■□□ 2.06
Pcdhb5Q91XZ5 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC27.9■■■□□ 2.06
Pcdhb5Q91XZ5 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC27.9■■■□□ 2.06
Pcdhb5Q91XZ5 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC27.9■■■□□ 2.06
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms