Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhga3Q91XY5 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhga3Q91XY5 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhga3Q91XY5 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
Pcdhga3Q91XY5 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhga3Q91XY5 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhga3Q91XY5 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhga3Q91XY5 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhga3Q91XY5 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhga3Q91XY5 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhga3Q91XY5 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhga3Q91XY5 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhga3Q91XY5 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Pcdhga3Q91XY5 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.71■□□□□ 0.91
Pcdhga3Q91XY5 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Pcdhga3Q91XY5 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhga3Q91XY5 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhga3Q91XY5 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Pcdhga3Q91XY5 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhga3Q91XY5 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhga3Q91XY5 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.69■□□□□ 0.9
Pcdhga3Q91XY5 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhga3Q91XY5 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Pcdhga3Q91XY5 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhga3Q91XY5 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhga3Q91XY5 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhga3Q91XY5 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhga3Q91XY5 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhga3Q91XY5 Gm30023-201ENSMUST00000197970 889 ntBASIC20.67■□□□□ 0.9
Pcdhga3Q91XY5 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Pcdhga3Q91XY5 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Pcdhga3Q91XY5 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhga3Q91XY5 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhga3Q91XY5 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhga3Q91XY5 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga3Q91XY5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.65■□□□□ 0.9
Pcdhga3Q91XY5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga3Q91XY5 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Pcdhga3Q91XY5 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Pcdhga3Q91XY5 Nkain2-201ENSMUST00000092602 558 ntBASIC20.65■□□□□ 0.9
Pcdhga3Q91XY5 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga3Q91XY5 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
Pcdhga3Q91XY5 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdhga3Q91XY5 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Pcdhga3Q91XY5 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhga3Q91XY5 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhga3Q91XY5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhga3Q91XY5 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhga3Q91XY5 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Pcdhga3Q91XY5 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga3Q91XY5 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga3Q91XY5 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhga3Q91XY5 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga3Q91XY5 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.62■□□□□ 0.89
Pcdhga3Q91XY5 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhga3Q91XY5 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhga3Q91XY5 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.62■□□□□ 0.89
Pcdhga3Q91XY5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga3Q91XY5 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga3Q91XY5 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga3Q91XY5 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Pcdhga3Q91XY5 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga3Q91XY5 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Pcdhga3Q91XY5 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhga3Q91XY5 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhga3Q91XY5 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
Pcdhga3Q91XY5 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.6■□□□□ 0.89
Pcdhga3Q91XY5 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.6■□□□□ 0.89
Pcdhga3Q91XY5 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga3Q91XY5 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga3Q91XY5 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga3Q91XY5 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.59■□□□□ 0.89
Pcdhga3Q91XY5 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.59■□□□□ 0.89
Pcdhga3Q91XY5 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga3Q91XY5 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga3Q91XY5 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Pcdhga3Q91XY5 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Pcdhga3Q91XY5 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhga3Q91XY5 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhga3Q91XY5 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Pcdhga3Q91XY5 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhga3Q91XY5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhga3Q91XY5 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhga3Q91XY5 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhga3Q91XY5 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.56■□□□□ 0.88
Pcdhga3Q91XY5 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhga3Q91XY5 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhga3Q91XY5 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhga3Q91XY5 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.55■□□□□ 0.88
Pcdhga3Q91XY5 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhga3Q91XY5 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Pcdhga3Q91XY5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhga3Q91XY5 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhga3Q91XY5 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.54■□□□□ 0.88
Pcdhga3Q91XY5 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhga3Q91XY5 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhga3Q91XY5 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhga3Q91XY5 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Pcdhga3Q91XY5 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhga3Q91XY5 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms