Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ubqln1Q8R317 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.24■■□□□ 1.15
Ubqln1Q8R317 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ubqln1Q8R317 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ubqln1Q8R317 Gm6821-201ENSMUST00000107540 542 ntBASIC22.22■■□□□ 1.15
Ubqln1Q8R317 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ubqln1Q8R317 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Ubqln1Q8R317 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Ubqln1Q8R317 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Ubqln1Q8R317 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ubqln1Q8R317 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ubqln1Q8R317 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.2■■□□□ 1.14
Ubqln1Q8R317 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ubqln1Q8R317 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Ubqln1Q8R317 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ubqln1Q8R317 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ubqln1Q8R317 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.18■■□□□ 1.14
Ubqln1Q8R317 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ubqln1Q8R317 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ubqln1Q8R317 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ubqln1Q8R317 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ubqln1Q8R317 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ubqln1Q8R317 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ubqln1Q8R317 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.15■■□□□ 1.14
Ubqln1Q8R317 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ubqln1Q8R317 Gm8503-201ENSMUST00000118131 455 ntBASIC22.15■■□□□ 1.14
Ubqln1Q8R317 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ubqln1Q8R317 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Ubqln1Q8R317 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ubqln1Q8R317 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Ubqln1Q8R317 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Ubqln1Q8R317 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Ubqln1Q8R317 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.14■■□□□ 1.13
Ubqln1Q8R317 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.14■■□□□ 1.13
Ubqln1Q8R317 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ubqln1Q8R317 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ubqln1Q8R317 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ubqln1Q8R317 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.13■■□□□ 1.13
Ubqln1Q8R317 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC22.13■■□□□ 1.13
Ubqln1Q8R317 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ubqln1Q8R317 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.12■■□□□ 1.13
Ubqln1Q8R317 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ubqln1Q8R317 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ubqln1Q8R317 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
Ubqln1Q8R317 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ubqln1Q8R317 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ubqln1Q8R317 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ubqln1Q8R317 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ubqln1Q8R317 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ubqln1Q8R317 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Ubqln1Q8R317 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ubqln1Q8R317 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Ubqln1Q8R317 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Ubqln1Q8R317 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.08■■□□□ 1.12
Ubqln1Q8R317 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ubqln1Q8R317 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ubqln1Q8R317 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.07■■□□□ 1.12
Ubqln1Q8R317 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ubqln1Q8R317 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ubqln1Q8R317 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ubqln1Q8R317 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.05■■□□□ 1.12
Ubqln1Q8R317 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ubqln1Q8R317 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.05■■□□□ 1.12
Ubqln1Q8R317 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ubqln1Q8R317 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ubqln1Q8R317 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Ubqln1Q8R317 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.03■■□□□ 1.12
Ubqln1Q8R317 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ubqln1Q8R317 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ubqln1Q8R317 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.11
Ubqln1Q8R317 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.02■■□□□ 1.11
Ubqln1Q8R317 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ubqln1Q8R317 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ubqln1Q8R317 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.01■■□□□ 1.11
Ubqln1Q8R317 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.01■■□□□ 1.11
Ubqln1Q8R317 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Ubqln1Q8R317 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22■■□□□ 1.11
Ubqln1Q8R317 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ubqln1Q8R317 Particl-201ENSMUST00000205370 1560 ntBASIC21.99■■□□□ 1.11
Ubqln1Q8R317 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Ubqln1Q8R317 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ubqln1Q8R317 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Ubqln1Q8R317 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ubqln1Q8R317 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
Ubqln1Q8R317 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ubqln1Q8R317 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ubqln1Q8R317 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ubqln1Q8R317 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Ubqln1Q8R317 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ubqln1Q8R317 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ubqln1Q8R317 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Ubqln1Q8R317 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ubqln1Q8R317 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ubqln1Q8R317 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ubqln1Q8R317 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ubqln1Q8R317 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ubqln1Q8R317 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ubqln1Q8R317 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Ubqln1Q8R317 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.94■■□□□ 1.1
Ubqln1Q8R317 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.94■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms