Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Rtn1Q8K0T0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Rtn1Q8K0T0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Rtn1Q8K0T0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Rtn1Q8K0T0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC27.33■■□□□ 1.97
Rtn1Q8K0T0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Rtn1Q8K0T0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Rtn1Q8K0T0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Rtn1Q8K0T0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Rtn1Q8K0T0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Rtn1Q8K0T0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC27.31■■□□□ 1.96
Rtn1Q8K0T0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
Rtn1Q8K0T0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Rtn1Q8K0T0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Rtn1Q8K0T0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Rtn1Q8K0T0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Rtn1Q8K0T0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Rtn1Q8K0T0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC27.28■■□□□ 1.96
Rtn1Q8K0T0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Rtn1Q8K0T0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Rtn1Q8K0T0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
Rtn1Q8K0T0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC27.27■■□□□ 1.96
Rtn1Q8K0T0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Rtn1Q8K0T0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Rtn1Q8K0T0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
Rtn1Q8K0T0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC27.24■■□□□ 1.95
Rtn1Q8K0T0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Rtn1Q8K0T0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Rtn1Q8K0T0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Rtn1Q8K0T0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Rtn1Q8K0T0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Rtn1Q8K0T0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Rtn1Q8K0T0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
Rtn1Q8K0T0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Rtn1Q8K0T0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Rtn1Q8K0T0 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Rtn1Q8K0T0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Rtn1Q8K0T0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Rtn1Q8K0T0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Rtn1Q8K0T0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Rtn1Q8K0T0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rtn1Q8K0T0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Rtn1Q8K0T0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
Rtn1Q8K0T0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
Rtn1Q8K0T0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Rtn1Q8K0T0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Rtn1Q8K0T0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Rtn1Q8K0T0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Rtn1Q8K0T0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
Rtn1Q8K0T0 Gm37847-201ENSMUST00000192163 1497 ntBASIC27.14■■□□□ 1.94
Rtn1Q8K0T0 Gm31748-201ENSMUST00000194938 1497 ntBASIC27.14■■□□□ 1.94
Rtn1Q8K0T0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
Rtn1Q8K0T0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Rtn1Q8K0T0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
Rtn1Q8K0T0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
Rtn1Q8K0T0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Rtn1Q8K0T0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Rtn1Q8K0T0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Rtn1Q8K0T0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Rtn1Q8K0T0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
Rtn1Q8K0T0 Particl-201ENSMUST00000205370 1560 ntBASIC27.1■■□□□ 1.93
Rtn1Q8K0T0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
Rtn1Q8K0T0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Rtn1Q8K0T0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Rtn1Q8K0T0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC27.1■■□□□ 1.93
Rtn1Q8K0T0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Rtn1Q8K0T0 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Rtn1Q8K0T0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Rtn1Q8K0T0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
Rtn1Q8K0T0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Rtn1Q8K0T0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC27.06■■□□□ 1.92
Rtn1Q8K0T0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Rtn1Q8K0T0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Rtn1Q8K0T0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Rtn1Q8K0T0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC27.04■■□□□ 1.92
Rtn1Q8K0T0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
Rtn1Q8K0T0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC27.04■■□□□ 1.92
Rtn1Q8K0T0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC27.04■■□□□ 1.92
Rtn1Q8K0T0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Rtn1Q8K0T0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
Rtn1Q8K0T0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
Rtn1Q8K0T0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC27.03■■□□□ 1.92
Rtn1Q8K0T0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Rtn1Q8K0T0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC27.01■■□□□ 1.91
Rtn1Q8K0T0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC27.01■■□□□ 1.91
Rtn1Q8K0T0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC27.01■■□□□ 1.91
Rtn1Q8K0T0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC27.01■■□□□ 1.91
Rtn1Q8K0T0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC27.01■■□□□ 1.91
Rtn1Q8K0T0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC27■■□□□ 1.91
Rtn1Q8K0T0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
Rtn1Q8K0T0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC26.99■■□□□ 1.91
Rtn1Q8K0T0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Rtn1Q8K0T0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Rtn1Q8K0T0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Rtn1Q8K0T0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
Rtn1Q8K0T0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC26.95■■□□□ 1.91
Rtn1Q8K0T0 Gm37136-201ENSMUST00000194368 194 ntBASIC26.95■■□□□ 1.9
Rtn1Q8K0T0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC26.95■■□□□ 1.9
Rtn1Q8K0T0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.9
Rtn1Q8K0T0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms