Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Sox30Q8CGW4 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.18■■□□□ 1.78
Sox30Q8CGW4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Sox30Q8CGW4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Sox30Q8CGW4 Gm43863-201ENSMUST00000203822 1192 ntBASIC26.16■■□□□ 1.78
Sox30Q8CGW4 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
Sox30Q8CGW4 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Sox30Q8CGW4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Sox30Q8CGW4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC26.15■■□□□ 1.78
Sox30Q8CGW4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Sox30Q8CGW4 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Sox30Q8CGW4 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Sox30Q8CGW4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Sox30Q8CGW4 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.14■■□□□ 1.77
Sox30Q8CGW4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Sox30Q8CGW4 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Sox30Q8CGW4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.12■■□□□ 1.77
Sox30Q8CGW4 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
Sox30Q8CGW4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Sox30Q8CGW4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
Sox30Q8CGW4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Sox30Q8CGW4 AC157572.2-201ENSMUST00000226970 908 ntBASIC26.1■■□□□ 1.77
Sox30Q8CGW4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Sox30Q8CGW4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Sox30Q8CGW4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
Sox30Q8CGW4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Sox30Q8CGW4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC26.08■■□□□ 1.77
Sox30Q8CGW4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC26.08■■□□□ 1.76
Sox30Q8CGW4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Sox30Q8CGW4 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Sox30Q8CGW4 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Sox30Q8CGW4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Sox30Q8CGW4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Sox30Q8CGW4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Sox30Q8CGW4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
Sox30Q8CGW4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
Sox30Q8CGW4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Sox30Q8CGW4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Sox30Q8CGW4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
Sox30Q8CGW4 Il17rd-202ENSMUST00000223942 2186 ntBASIC26.03■■□□□ 1.76
Sox30Q8CGW4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Sox30Q8CGW4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Sox30Q8CGW4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Sox30Q8CGW4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Sox30Q8CGW4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Sox30Q8CGW4 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC26.01■■□□□ 1.75
Sox30Q8CGW4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC26.01■■□□□ 1.75
Sox30Q8CGW4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
Sox30Q8CGW4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Sox30Q8CGW4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Sox30Q8CGW4 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Sox30Q8CGW4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
Sox30Q8CGW4 Zfp131-205ENSMUST00000223812 663 ntBASIC25.98■■□□□ 1.75
Sox30Q8CGW4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
Sox30Q8CGW4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Sox30Q8CGW4 Particl-201ENSMUST00000205370 1560 ntBASIC25.96■■□□□ 1.75
Sox30Q8CGW4 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Sox30Q8CGW4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
Sox30Q8CGW4 Gm37847-201ENSMUST00000192163 1497 ntBASIC25.96■■□□□ 1.75
Sox30Q8CGW4 Gm31748-201ENSMUST00000194938 1497 ntBASIC25.96■■□□□ 1.75
Sox30Q8CGW4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Sox30Q8CGW4 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25.95■■□□□ 1.74
Sox30Q8CGW4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
Sox30Q8CGW4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
Sox30Q8CGW4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC25.93■■□□□ 1.74
Sox30Q8CGW4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Sox30Q8CGW4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25.92■■□□□ 1.74
Sox30Q8CGW4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
Sox30Q8CGW4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Sox30Q8CGW4 Gm30023-201ENSMUST00000197970 889 ntBASIC25.91■■□□□ 1.74
Sox30Q8CGW4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
Sox30Q8CGW4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC25.9■■□□□ 1.74
Sox30Q8CGW4 Gm24970-201ENSMUST00000175582 82 ntBASIC25.9■■□□□ 1.74
Sox30Q8CGW4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Sox30Q8CGW4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Sox30Q8CGW4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Sox30Q8CGW4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.89■■□□□ 1.74
Sox30Q8CGW4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC25.89■■□□□ 1.74
Sox30Q8CGW4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Sox30Q8CGW4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.73
Sox30Q8CGW4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC25.89■■□□□ 1.73
Sox30Q8CGW4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Sox30Q8CGW4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Sox30Q8CGW4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.87■■□□□ 1.73
Sox30Q8CGW4 Gm9397-201ENSMUST00000200125 605 ntBASIC25.87■■□□□ 1.73
Sox30Q8CGW4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.87■■□□□ 1.73
Sox30Q8CGW4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Sox30Q8CGW4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Sox30Q8CGW4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Sox30Q8CGW4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Sox30Q8CGW4 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.85■■□□□ 1.73
Sox30Q8CGW4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Sox30Q8CGW4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Sox30Q8CGW4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Sox30Q8CGW4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Sox30Q8CGW4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Sox30Q8CGW4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Sox30Q8CGW4 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC25.84■■□□□ 1.73
Sox30Q8CGW4 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.83■■□□□ 1.73
Sox30Q8CGW4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms