Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC38.84■■■■□ 3.81
Pabpn1Q8CCS6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC38.83■■■■□ 3.81
Pabpn1Q8CCS6 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC38.83■■■■□ 3.81
Pabpn1Q8CCS6 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC38.82■■■■□ 3.8
Pabpn1Q8CCS6 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC38.82■■■■□ 3.8
Pabpn1Q8CCS6 Rps24-207ENSMUST00000224568 714 ntBASIC38.81■■■■□ 3.8
Pabpn1Q8CCS6 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC38.8■■■■□ 3.8
Pabpn1Q8CCS6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC38.8■■■■□ 3.8
Pabpn1Q8CCS6 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC38.79■■■■□ 3.8
Pabpn1Q8CCS6 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC38.79■■■■□ 3.8
Pabpn1Q8CCS6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC38.79■■■■□ 3.8
Pabpn1Q8CCS6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC38.78■■■■□ 3.8
Pabpn1Q8CCS6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC38.78■■■■□ 3.8
Pabpn1Q8CCS6 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC38.78■■■■□ 3.8
Pabpn1Q8CCS6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC38.76■■■■□ 3.8
Pabpn1Q8CCS6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC38.75■■■■□ 3.79
Pabpn1Q8CCS6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC38.75■■■■□ 3.79
Pabpn1Q8CCS6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC38.74■■■■□ 3.79
Pabpn1Q8CCS6 Gm30023-201ENSMUST00000197970 889 ntBASIC38.74■■■■□ 3.79
Pabpn1Q8CCS6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC38.74■■■■□ 3.79
Pabpn1Q8CCS6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
Pabpn1Q8CCS6 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC38.72■■■■□ 3.79
Pabpn1Q8CCS6 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC38.7■■■■□ 3.79
Pabpn1Q8CCS6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC38.7■■■■□ 3.79
Pabpn1Q8CCS6 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC38.7■■■■□ 3.79
Pabpn1Q8CCS6 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC38.68■■■■□ 3.78
Pabpn1Q8CCS6 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC38.68■■■■□ 3.78
Pabpn1Q8CCS6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC38.68■■■■□ 3.78
Pabpn1Q8CCS6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC38.68■■■■□ 3.78
Pabpn1Q8CCS6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC38.66■■■■□ 3.78
Pabpn1Q8CCS6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC38.66■■■■□ 3.78
Pabpn1Q8CCS6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC38.65■■■■□ 3.78
Pabpn1Q8CCS6 Serp2-204ENSMUST00000228055 705 ntBASIC38.65■■■■□ 3.78
Pabpn1Q8CCS6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
Pabpn1Q8CCS6 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
Pabpn1Q8CCS6 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC38.63■■■■□ 3.77
Pabpn1Q8CCS6 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC38.63■■■■□ 3.77
Pabpn1Q8CCS6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC38.63■■■■□ 3.77
Pabpn1Q8CCS6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC38.62■■■■□ 3.77
Pabpn1Q8CCS6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC38.61■■■■□ 3.77
Pabpn1Q8CCS6 Gm45102-201ENSMUST00000207427 857 ntBASIC38.6■■■■□ 3.77
Pabpn1Q8CCS6 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC38.6■■■■□ 3.77
Pabpn1Q8CCS6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC38.59■■■■□ 3.77
Pabpn1Q8CCS6 Gm5297-201ENSMUST00000198555 1171 ntBASIC38.58■■■■□ 3.77
Pabpn1Q8CCS6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC38.58■■■■□ 3.77
Pabpn1Q8CCS6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC38.57■■■■□ 3.76
Pabpn1Q8CCS6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC38.57■■■■□ 3.76
Pabpn1Q8CCS6 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC38.56■■■■□ 3.76
Pabpn1Q8CCS6 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC38.56■■■■□ 3.76
Pabpn1Q8CCS6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC38.56■■■■□ 3.76
Pabpn1Q8CCS6 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC38.56■■■■□ 3.76
Pabpn1Q8CCS6 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC38.55■■■■□ 3.76
Pabpn1Q8CCS6 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC38.54■■■■□ 3.76
Pabpn1Q8CCS6 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC38.54■■■■□ 3.76
Pabpn1Q8CCS6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC38.53■■■■□ 3.76
Pabpn1Q8CCS6 AC151971.4-201ENSMUST00000214717 704 ntBASIC38.52■■■■□ 3.76
Pabpn1Q8CCS6 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC38.52■■■■□ 3.76
Pabpn1Q8CCS6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC38.52■■■■□ 3.76
Pabpn1Q8CCS6 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC38.51■■■■□ 3.76
Pabpn1Q8CCS6 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC38.51■■■■□ 3.76
Pabpn1Q8CCS6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC38.51■■■■□ 3.76
Pabpn1Q8CCS6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC38.5■■■■□ 3.75
Pabpn1Q8CCS6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC38.5■■■■□ 3.75
Pabpn1Q8CCS6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC38.49■■■■□ 3.75
Pabpn1Q8CCS6 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC38.49■■■■□ 3.75
Pabpn1Q8CCS6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC38.48■■■■□ 3.75
Pabpn1Q8CCS6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC38.48■■■■□ 3.75
Pabpn1Q8CCS6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC38.47■■■■□ 3.75
Pabpn1Q8CCS6 AC153911.1-201ENSMUST00000220378 758 ntBASIC38.46■■■■□ 3.75
Pabpn1Q8CCS6 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC38.46■■■■□ 3.75
Pabpn1Q8CCS6 Gm12818-201ENSMUST00000117562 1349 ntBASIC38.45■■■■□ 3.75
Pabpn1Q8CCS6 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC38.45■■■■□ 3.75
Pabpn1Q8CCS6 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC38.45■■■■□ 3.75
Pabpn1Q8CCS6 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC38.45■■■■□ 3.75
Pabpn1Q8CCS6 Gm14117-201ENSMUST00000122417 843 ntBASIC38.44■■■■□ 3.74
Pabpn1Q8CCS6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC38.43■■■■□ 3.74
Pabpn1Q8CCS6 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC38.43■■■■□ 3.74
Pabpn1Q8CCS6 Gm15820-201ENSMUST00000201566 728 ntBASIC38.42■■■■□ 3.74
Pabpn1Q8CCS6 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC38.41■■■■□ 3.74
Pabpn1Q8CCS6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC38.4■■■■□ 3.74
Pabpn1Q8CCS6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC38.4■■■■□ 3.74
Pabpn1Q8CCS6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC38.38■■■■□ 3.74
Pabpn1Q8CCS6 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC38.38■■■■□ 3.73
Pabpn1Q8CCS6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC38.36■■■■□ 3.73
Pabpn1Q8CCS6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC38.36■■■■□ 3.73
Pabpn1Q8CCS6 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC38.36■■■■□ 3.73
Pabpn1Q8CCS6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC38.35■■■■□ 3.73
Pabpn1Q8CCS6 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC38.35■■■■□ 3.73
Pabpn1Q8CCS6 Gm13889-201ENSMUST00000099689 1386 ntBASIC38.34■■■■□ 3.73
Pabpn1Q8CCS6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC38.34■■■■□ 3.73
Pabpn1Q8CCS6 Gm9910-201ENSMUST00000195385 1550 ntBASIC38.33■■■■□ 3.73
Pabpn1Q8CCS6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC38.32■■■■□ 3.72
Pabpn1Q8CCS6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC38.31■■■■□ 3.72
Pabpn1Q8CCS6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC38.31■■■■□ 3.72
Pabpn1Q8CCS6 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC38.29■■■■□ 3.72
Pabpn1Q8CCS6 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC38.27■■■■□ 3.72
Pabpn1Q8CCS6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC38.26■■■■□ 3.72
Pabpn1Q8CCS6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC38.26■■■■□ 3.72
Pabpn1Q8CCS6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC38.26■■■■□ 3.71
Pabpn1Q8CCS6 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC38.24■■■■□ 3.71
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms