Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.82■■□□□ 1.4
Rfx6Q8C7R7 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Rfx6Q8C7R7 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Rfx6Q8C7R7 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.8■■□□□ 1.4
Rfx6Q8C7R7 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rfx6Q8C7R7 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rfx6Q8C7R7 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rfx6Q8C7R7 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rfx6Q8C7R7 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rfx6Q8C7R7 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rfx6Q8C7R7 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.78■■□□□ 1.4
Rfx6Q8C7R7 Gm9397-201ENSMUST00000200125 605 ntBASIC23.78■■□□□ 1.4
Rfx6Q8C7R7 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Rfx6Q8C7R7 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rfx6Q8C7R7 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rfx6Q8C7R7 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rfx6Q8C7R7 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rfx6Q8C7R7 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Rfx6Q8C7R7 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rfx6Q8C7R7 Gm24970-201ENSMUST00000175582 82 ntBASIC23.75■■□□□ 1.39
Rfx6Q8C7R7 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Rfx6Q8C7R7 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rfx6Q8C7R7 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Rfx6Q8C7R7 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
Rfx6Q8C7R7 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rfx6Q8C7R7 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rfx6Q8C7R7 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Rfx6Q8C7R7 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Rfx6Q8C7R7 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rfx6Q8C7R7 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.73■■□□□ 1.39
Rfx6Q8C7R7 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.73■■□□□ 1.39
Rfx6Q8C7R7 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rfx6Q8C7R7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Rfx6Q8C7R7 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rfx6Q8C7R7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Rfx6Q8C7R7 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rfx6Q8C7R7 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rfx6Q8C7R7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rfx6Q8C7R7 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rfx6Q8C7R7 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rfx6Q8C7R7 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Rfx6Q8C7R7 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Rfx6Q8C7R7 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Rfx6Q8C7R7 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rfx6Q8C7R7 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rfx6Q8C7R7 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.69■■□□□ 1.38
Rfx6Q8C7R7 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Rfx6Q8C7R7 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Rfx6Q8C7R7 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.68■■□□□ 1.38
Rfx6Q8C7R7 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Rfx6Q8C7R7 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rfx6Q8C7R7 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rfx6Q8C7R7 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.67■■□□□ 1.38
Rfx6Q8C7R7 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rfx6Q8C7R7 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rfx6Q8C7R7 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
Rfx6Q8C7R7 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.66■■□□□ 1.38
Rfx6Q8C7R7 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
Rfx6Q8C7R7 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rfx6Q8C7R7 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.65■■□□□ 1.38
Rfx6Q8C7R7 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Rfx6Q8C7R7 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rfx6Q8C7R7 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Rfx6Q8C7R7 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rfx6Q8C7R7 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Rfx6Q8C7R7 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.63■■□□□ 1.37
Rfx6Q8C7R7 Gm30023-201ENSMUST00000197970 889 ntBASIC23.63■■□□□ 1.37
Rfx6Q8C7R7 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rfx6Q8C7R7 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rfx6Q8C7R7 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC23.63■■□□□ 1.37
Rfx6Q8C7R7 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rfx6Q8C7R7 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Rfx6Q8C7R7 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rfx6Q8C7R7 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Rfx6Q8C7R7 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC23.62■■□□□ 1.37
Rfx6Q8C7R7 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.62■■□□□ 1.37
Rfx6Q8C7R7 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rfx6Q8C7R7 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rfx6Q8C7R7 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rfx6Q8C7R7 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rfx6Q8C7R7 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Rfx6Q8C7R7 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.6■■□□□ 1.37
Rfx6Q8C7R7 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rfx6Q8C7R7 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Rfx6Q8C7R7 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.58■■□□□ 1.37
Rfx6Q8C7R7 Gm45855-201ENSMUST00000212546 880 ntBASIC23.58■■□□□ 1.37
Rfx6Q8C7R7 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rfx6Q8C7R7 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
Rfx6Q8C7R7 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rfx6Q8C7R7 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Rfx6Q8C7R7 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Rfx6Q8C7R7 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.56■■□□□ 1.36
Rfx6Q8C7R7 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.56■■□□□ 1.36
Rfx6Q8C7R7 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rfx6Q8C7R7 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rfx6Q8C7R7 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rfx6Q8C7R7 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Rfx6Q8C7R7 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rfx6Q8C7R7 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rfx6Q8C7R7 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms