Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Eri3Q8C460 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Eri3Q8C460 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.43■■□□□ 1.18
Eri3Q8C460 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.43■■□□□ 1.18
Eri3Q8C460 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Eri3Q8C460 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.42■■□□□ 1.18
Eri3Q8C460 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.42■■□□□ 1.18
Eri3Q8C460 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Eri3Q8C460 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Eri3Q8C460 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Eri3Q8C460 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Eri3Q8C460 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Eri3Q8C460 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Eri3Q8C460 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Eri3Q8C460 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Eri3Q8C460 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Eri3Q8C460 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.35■■□□□ 1.17
Eri3Q8C460 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Eri3Q8C460 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Eri3Q8C460 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Eri3Q8C460 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.34■■□□□ 1.17
Eri3Q8C460 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Eri3Q8C460 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.34■■□□□ 1.17
Eri3Q8C460 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Eri3Q8C460 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.33■■□□□ 1.17
Eri3Q8C460 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Eri3Q8C460 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Eri3Q8C460 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Eri3Q8C460 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Eri3Q8C460 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Eri3Q8C460 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Eri3Q8C460 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Eri3Q8C460 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Eri3Q8C460 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Eri3Q8C460 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Eri3Q8C460 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Eri3Q8C460 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Eri3Q8C460 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Eri3Q8C460 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Eri3Q8C460 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Eri3Q8C460 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Eri3Q8C460 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Eri3Q8C460 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.27■■□□□ 1.16
Eri3Q8C460 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Eri3Q8C460 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
Eri3Q8C460 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Eri3Q8C460 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Eri3Q8C460 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Eri3Q8C460 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Eri3Q8C460 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Eri3Q8C460 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Eri3Q8C460 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Eri3Q8C460 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Eri3Q8C460 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Eri3Q8C460 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Eri3Q8C460 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Eri3Q8C460 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Eri3Q8C460 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Eri3Q8C460 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Eri3Q8C460 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Eri3Q8C460 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Eri3Q8C460 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Eri3Q8C460 Particl-201ENSMUST00000205370 1560 ntBASIC22.21■■□□□ 1.15
Eri3Q8C460 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Eri3Q8C460 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.2■■□□□ 1.14
Eri3Q8C460 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.2■■□□□ 1.14
Eri3Q8C460 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Eri3Q8C460 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Eri3Q8C460 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Eri3Q8C460 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Eri3Q8C460 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Eri3Q8C460 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Eri3Q8C460 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Eri3Q8C460 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Eri3Q8C460 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Eri3Q8C460 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Eri3Q8C460 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Eri3Q8C460 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Eri3Q8C460 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Eri3Q8C460 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Eri3Q8C460 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Eri3Q8C460 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Eri3Q8C460 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Eri3Q8C460 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Eri3Q8C460 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Eri3Q8C460 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Eri3Q8C460 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.13■■□□□ 1.13
Eri3Q8C460 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Eri3Q8C460 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Eri3Q8C460 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.12■■□□□ 1.13
Eri3Q8C460 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.12■■□□□ 1.13
Eri3Q8C460 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.12■■□□□ 1.13
Eri3Q8C460 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Eri3Q8C460 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.11■■□□□ 1.13
Eri3Q8C460 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Eri3Q8C460 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Eri3Q8C460 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.1■■□□□ 1.13
Eri3Q8C460 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.1■■□□□ 1.13
Eri3Q8C460 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.1■■□□□ 1.13
Eri3Q8C460 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.1■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms