Protein–RNA interactions for Protein: Q8BXQ3

Lrtm1, Leucine-rich repeat and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrtm1Q8BXQ3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.68■□□□□ 0.9
Lrtm1Q8BXQ3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.68■□□□□ 0.9
Lrtm1Q8BXQ3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lrtm1Q8BXQ3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Lrtm1Q8BXQ3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Lrtm1Q8BXQ3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Lrtm1Q8BXQ3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lrtm1Q8BXQ3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Lrtm1Q8BXQ3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lrtm1Q8BXQ3 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lrtm1Q8BXQ3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Lrtm1Q8BXQ3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Lrtm1Q8BXQ3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.63■□□□□ 0.89
Lrtm1Q8BXQ3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Lrtm1Q8BXQ3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lrtm1Q8BXQ3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Lrtm1Q8BXQ3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Lrtm1Q8BXQ3 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Lrtm1Q8BXQ3 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Lrtm1Q8BXQ3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Lrtm1Q8BXQ3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lrtm1Q8BXQ3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lrtm1Q8BXQ3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lrtm1Q8BXQ3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.58■□□□□ 0.89
Lrtm1Q8BXQ3 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lrtm1Q8BXQ3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lrtm1Q8BXQ3 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lrtm1Q8BXQ3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrtm1Q8BXQ3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrtm1Q8BXQ3 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Lrtm1Q8BXQ3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lrtm1Q8BXQ3 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Lrtm1Q8BXQ3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrtm1Q8BXQ3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.55■□□□□ 0.88
Lrtm1Q8BXQ3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.55■□□□□ 0.88
Lrtm1Q8BXQ3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrtm1Q8BXQ3 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Lrtm1Q8BXQ3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrtm1Q8BXQ3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrtm1Q8BXQ3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lrtm1Q8BXQ3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lrtm1Q8BXQ3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Lrtm1Q8BXQ3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lrtm1Q8BXQ3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrtm1Q8BXQ3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.51■□□□□ 0.87
Lrtm1Q8BXQ3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.51■□□□□ 0.87
Lrtm1Q8BXQ3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Lrtm1Q8BXQ3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Lrtm1Q8BXQ3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lrtm1Q8BXQ3 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lrtm1Q8BXQ3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrtm1Q8BXQ3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lrtm1Q8BXQ3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Lrtm1Q8BXQ3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Lrtm1Q8BXQ3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lrtm1Q8BXQ3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.48■□□□□ 0.87
Lrtm1Q8BXQ3 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.48■□□□□ 0.87
Lrtm1Q8BXQ3 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.48■□□□□ 0.87
Lrtm1Q8BXQ3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lrtm1Q8BXQ3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Lrtm1Q8BXQ3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lrtm1Q8BXQ3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lrtm1Q8BXQ3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lrtm1Q8BXQ3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lrtm1Q8BXQ3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Lrtm1Q8BXQ3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lrtm1Q8BXQ3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lrtm1Q8BXQ3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lrtm1Q8BXQ3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lrtm1Q8BXQ3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lrtm1Q8BXQ3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lrtm1Q8BXQ3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lrtm1Q8BXQ3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Lrtm1Q8BXQ3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Lrtm1Q8BXQ3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lrtm1Q8BXQ3 Particl-201ENSMUST00000205370 1560 ntBASIC20.45■□□□□ 0.86
Lrtm1Q8BXQ3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lrtm1Q8BXQ3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lrtm1Q8BXQ3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lrtm1Q8BXQ3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
Lrtm1Q8BXQ3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lrtm1Q8BXQ3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lrtm1Q8BXQ3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.43■□□□□ 0.86
Lrtm1Q8BXQ3 Gm7432-201ENSMUST00000210343 879 ntBASIC20.43■□□□□ 0.86
Lrtm1Q8BXQ3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Lrtm1Q8BXQ3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lrtm1Q8BXQ3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Lrtm1Q8BXQ3 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.42■□□□□ 0.86
Lrtm1Q8BXQ3 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.42■□□□□ 0.86
Lrtm1Q8BXQ3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
Lrtm1Q8BXQ3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lrtm1Q8BXQ3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lrtm1Q8BXQ3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lrtm1Q8BXQ3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lrtm1Q8BXQ3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Lrtm1Q8BXQ3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Lrtm1Q8BXQ3 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lrtm1Q8BXQ3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.39■□□□□ 0.86
Lrtm1Q8BXQ3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lrtm1Q8BXQ3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 108.4 ms